Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKPCHFAQFDLQPAFLVDLDELGQRYRELVRSVHPDRFADAPEREQRLALERAAQLNEAYQTLKSAPRRALYLLTLSGHELPLEA-TVQDPEFLLQQMQLREELEELQDSADLAGVATFKRRLKAAQAELEREFAACWDDAQRREEAERLVRRMQFLDKLAQEVRQLEERLDD-
1FPO Chain:A ((1-171))
---MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLD-NETWDAAADTCRKLRFLDKLRSSAEQLEEKLLDF
General information:
TITO was launched using:
RESULT:
Template:
1FPO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48632 for 1088 contacts (-44.7/contact) +
2D Compatibility (PS) -19729 + (NN) -22725 + (LL) 24
1D Compatibility (HY) -10800 + (ID) 3100
Total energy: -104962.0 ( -96.47 by residue)
QMean score : 0.820
(partial model without unconserved sides chains):
PDB file :
Tito_1FPO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FPO-query.scw
PDB file :
Tito_Scwrl_1FPO.pdb
: