Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQPVAFVTGCSSGIGRALA-----DAFQRAGYRVWASARKE-------DDVRALA--EAGFQAVQLDVNDAAALARLAEELGVEAAGLDVLVNNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFP-LLRRKSGLVVNVGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVEVLEVQPGAIASNFGASASREMDSVVDERSPWWPLRRQIQARAAASQ------DNPTSAEDFARQLLAAVQRRPRPPLVRIGNGSRALPALARWLPRGLLERLLKKRFGLDTRL |
| 1IOL Chain:A ((4-263)) | ----VVLITGCSSGIGLHLAVRLASDPSQ--SFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARER--VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLEVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLD-RTDIHTFHRFYQYLAHSKQVFREAAQNP---EEVAEVFLTAL-RAPKPTL-RYFTTERFLPLL----------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IOL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -108222 for 1810 contacts (-59.8/contact) +
2D Compatibility (PS) -26183 + (NN) -13954 + (LL) 2880
1D Compatibility (HY) -20400 + (ID) 4750
Total energy: -170629.0 ( -94.27 by residue)
QMean score : 0.442
|
|
|