Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MNLSLYLLTVLIWGT---TWIAIKLQMGP-VAITLS-----IAYRFALAALVLFAVLL-LGRRLQRLDARGQRLCMAQGVCLFCLNFICFYTASQWIPSGLVAVVFS--------------TATLWNALNARLWF--GQRIASNVM----------AGGGLGLL-----GLGLLFWPELVGH------------------QATPETFYGLGLALLG-----TLCFSTGNMLSSLQQKAG----------------IRPLTGNAWSMLYG---TLILLALCLFQGVPLSFDWSARYVGSLL-------YLAIPGSVIGFTAYLTLVGRMGPDRAAYCTVLFPVV---ALNISAFAEGYRWTA------PALAGLVLVMLGNVLVFRKPKAPALAGPARST----- |
| 4J1Q Chain:A ((20-445)) | HMERLMLEPVWEKQNEELSYTEHIIVLFETERSVTDSIASHMKDARVITLNEAVGHIAERYQCYMQNIFELLQSKVRKLSAGRIIIQAIVPLEKEKQLFAGVSGLFKTAEIEFSKLTAQVIEIEKPEEMIDLHLKLKDDSRRPFDKQIRYEAGYRFVKGWREMVDTLHMPWRDEGVYLITGGAGSLGLLFAKEIANRTGRSTIVLTGRSVLSEDKENELEALRSIGAEVVYREADVSDQHAVRHLLEEIKERYGTLNGIIHGAGSSKDRFIIHKTNEEFQEVLQPKVSGLLHVDECSKDFPLDFFIFFSSVSGCLGNAGQADYAAANSFMDAFAEYRRSLAASKKRFGSTISFNWPLWEEGGMQVGAEDEKRMLKTTGMVPMPTDSGLKAFYQGIVS--DKPQVFVMEGQLQKMKQKLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -265957 for 2095 contacts (-126.9/contact) +
2D Compatibility (PS) -31038 + (NN) -7901 + (LL) 324
1D Compatibility (HY) -9200 + (ID) 2850
Total energy: -316622.0 ( -151.13 by residue)
QMean score : 0.177
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