Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEDRSSNGHKSWLDKITQAFAHEPRNRQELLELLRDAHDNKLLDSEALSIVEGAIQVADLQVRDIMVPRSQMMSIRSTQTPKEFLPAIIEAAHSRYPVVGESLDDVMGVLLAKDLLPLILHNDERPFDIKELLRPATFVPESKRLNVLLREFRANRNHMAIVIDEYGGVAGLVTIEDVLEQIVGDIEDEHDVEEDSYIKPLPSGDFIVKALTPVDAFNDFFGSEFSDEEFDTVGGLVMSAFGHLPKRNEVVELGEFRFRVLNADSRRVHLLRLSPLQN
4HG0 Chain:A ((51-274))
--------------------------------------------DEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPF-MRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALASIEDFNEAFGTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRI----------
General information:
TITO was launched using:
RESULT:
Template:
4HG0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138586 for 1558 contacts (-89.0/contact) +
2D Compatibility (PS) -23702 + (NN) -5944 + (LL) 3752
1D Compatibility (HY) -24400 + (ID) 5950
Total energy: -194830.0 ( -125.05 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_4HG0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HG0-query.scw
PDB file :
Tito_Scwrl_4HG0.pdb
: