Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAELQRASVTGGGLYERLLQRLALALDEADTAERLRDEHPTELELRGLSEAEMGLIRAYLDQDLHWLRGWHAAAEELALLERQPGRTPRPPRPQPPAPRRHVSLKQRQLLCALCGAPVQWSKGHGVLPCGHCGSQLFRSGNGR
1W2B Chain:Y ((30-55))
--------------------------------------------------------------------------------------------------------------CPVCGFKKLKRAGTGIWMCGHCGYKI-------
General information:
TITO was launched using:
RESULT:
Template:
1W2B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10692 for 134 contacts (-79.8/contact) +
2D Compatibility (PS) -2908 + (NN) -2353 + (LL) 8056
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -10797.0 ( -80.57 by residue)
QMean score : 0.703
(partial model without unconserved sides chains):
PDB file :
Tito_1W2B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2B-query.scw
PDB file :
Tito_Scwrl_1W2B.pdb
: