Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLLVLFCCLWLLPGVASAAPSVGEIRVVS-ETWTRYTQED--GRGVAWDLLRAVYEPAGVRLRIANEPYTRAVGLVLRGEADAWVG-AYRGEIDE--ALYPRWPYDVDPIAVLSLKDNP-PPPLEGLSRFRLSWMRGYAFARYFPT----LTPHSELQRRTSALPMLLNHRVDYFIDSRPELEEMLAGAGALAAEYRI--TDVT-----RLPLYLGFSDSPRGRELLALFDRRMRQLHASGELERIFARWNWPYAPLKAILPPKE
3TQL Chain:A ((2-227))
-----------------------DTIKFATEATYPPYVYMGGQVEGFGADIVKAVCKQMQAVCTISNQPWDSLIPSLKLGKFDALFGGMNITTARQKEVDFTD-PYYTNSVSFIADKNTPLTLSKQGLKGKIIGVQGGTTFDSYLQDSFGNSITIQRYPSEEDALMDLTSGRVDAVVGDTPLIKQWLKQNG--RREYVLIGKPVNDPNYFGKGVGIAVKKG--NQALLLKLNKALAAIKANGVYAAIVQKYF--------------
General information:
TITO was launched using:
RESULT:
Template:
3TQL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126352 for 1576 contacts (-80.2/contact) +
2D Compatibility (PS) -22860 + (NN) -12211 + (LL) 3464
1D Compatibility (HY) -12000 + (ID) 2000
Total energy: -171959.0 ( -109.11 by residue)
QMean score : 0.417
(partial model without unconserved sides chains):
PDB file :
Tito_3TQL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQL-query.scw
PDB file :
Tito_Scwrl_3TQL.pdb
: