Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFTGTHYRPRTDSETAADSAEKNTSDGRRRRIRAACDRLPRGAYLYCRRSPGNPRQCWAAAFRRHLIRFFPLDLPLFRPSAGSYSRNRLSSLMGLRKMSERIPAIQVEPAVPAAPSKQPPAPGKLPSAVNGPIYTRSFTGLFRNFRRLGGGLLFLLFFGTLWLNWNGRQAVLWDLPERKFYIFGATFWPQDFILLSALLIIAAFGLFFITVFAGRVWCGYTCPQSVWTWVFMWCEKVTEGDRNARIKLDQGPASAAKLLRKTAKHALWLGVSLVTAITFIGYFTPVRPLVADLFSFQLDLESLFWVLFFTAATYVNAGWLREQVCIHMCPYSRFQSVMFDKDTLIVSYDAARGESRGARKKGSDPRAQGLGDCIDCQQCVQVCPTG-IDIRD-------------------------------GLQIACIGCAACVDACDSIMDKMGYERGLVRYTSERALEGGQTRFLRPRLVGYAAVMLAMIGAFVVALDARPLASLDVTRDRGLFRENAAGQIENIYTLKVINKTQQPQRYRLQLDDAPEFRLQGEHTLSLKPGEILDFPVSVASTAERARAGSQPLAFSLRGIDDPSLAVGSTSTFVSPAR |
| 2C42 Chain:A ((684-756)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VPENCIQCNQCAFVCPHSAILPVLAKEEELVGAPANFTALEAKGKELKGYKFRIQINTLDCMGCGNCADICPP-------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16549 for 192 contacts (-86.2/contact) +
2D Compatibility (PS) -4099 + (NN) -790 + (LL) 36188
1D Compatibility (HY) -3200 + (ID) 750
Total energy: 10800.0 ( 56.25 by residue)
QMean score : 0.400
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