Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTPRPSLTLTLLQAREAAMSFFRPSLNQHGLTEQQWRVIRILRQQGEMESYQLANQACILRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQQCFVSMSGDMEKNYQRIQERFGEEKLAQLLELLNELKKIKP
2FBI Chain:A ((5-140))
----RPSLTLTLLQAREAAMSFFRPSLNQHGLTEQQWRVIRILRQQGEMESYQLANQACILRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQQCFVSMSGDMEKNYQRIQERFGEEKLAQLLELLNELKKIKP
General information:
TITO was launched using:
RESULT:
Template:
2FBI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67849 for 846 contacts (-80.2/contact) +
2D Compatibility (PS) -15259 + (NN) -11106 + (LL) 92
1D Compatibility (HY) -18400 + (ID) 6800
Total energy: -119322.0 ( -141.04 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_2FBI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FBI-query.scw
PDB file :
Tito_Scwrl_2FBI.pdb
: