Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGQDKLKVAVLFGGSSEERDVSIASGAQVIQALRSAGHQVLAVDTASGLLGAEEERRLLASKVKEVPPDSDSLAIIRSGKQSLLSAGELAGVDVFFLALHGGTGEDGTLQALLDAGGFAYTGSGHLASAMAMDKDVAKRLFLAAGVETASWLMAPASEE---EVREQLGFPLVVKPNSQGSTVGLSIVHSQAELQPAIELAGRYGDEVMLERFVAGREVTVGVLDDQALPVGEILLGGQEVFDYEHKYQAGAVREVFPADLPPAIAAEAQRLALKVHRALKLSGYSRTDFRLDEQGRLWCLEVNTLPGMTATSLLPQAAAAAGIGFAELCERICRLGIERCKGARKARS |
3R5X Chain:A ((2-305)) | ---NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMD--------------------------------L--IEKAKDIDFALLALHGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDWIELTKMEDLNFDELDKLGFPLVVKPNS----VGVKIVYDKDELISMLETVFEWDSEVVIEKYIKGEEITCSIFDGKQLPIISIRHAA-EFFDYNAKYDDA-STIEEVIELPAELKERVNKASLACYKALKCSVYARVDMMVKD-GIPYVMEVNTLPGMTQASLLPKSADAAGIHYSKLLDMIIETSLRVRKEE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R5X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185725 for 2383 contacts (-77.9/contact) +
2D Compatibility (PS) -33571 + (NN) -15073 + (LL) 2904
1D Compatibility (HY) -27200 + (ID) 5300
Total energy: -263965.0 ( -110.77 by residue)
QMean score : 0.489
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