Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGQRYRETPLDIERLRRLNRATVERYMAMKGAERLQRHSLFVEDGCAGNWTTESGEPLVFRGHESLRRLAEWLERCFPDWEWHNVRIFETEDPNHFWVECDGRGKALVPGYPQGYCENHYIHSFELENGRIKRNREFMNPIQKLRALGIAVPQIKRDGIPT
3FF0 Chain:A ((13-162))
-----------DAVELRRKNRETVVKYMNTKGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNIKVFETDDPNHFWVECDGHGKILFPGYPEGYYENHFLHSFELDDGKIKRNREFMNVFQQLRALSIPVPQIKREGIP-
General information:
TITO was launched using:
RESULT:
Template:
3FF0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35411 for 1002 contacts (-35.3/contact) +
2D Compatibility (PS) -16154 + (NN) -5481 + (LL) 612
1D Compatibility (HY) -16000 + (ID) 4950
Total energy: -77384.0 ( -77.23 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_3FF0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FF0-query.scw
PDB file :
Tito_Scwrl_3FF0.pdb
: