Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPDTTNPIGFTDANELREKNRATVEKYMNTKGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNINIFGTDDPNHFWVECDGHGKILFPGYPEGYYENHFLHSFELEDGKIKRNREFMNVFQQLRALSIPVPQIKREGIPT
3FF0 Chain:A ((4-162))--DNAIPQGFEDAVELRRKNRETVVKYMNTKGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNIKVFETDDPNHFWVECDGHGKILFPGYPEGYYENHFLHSFELDDGKIKRNREFMNVFQQLRALSIPVPQIKREGIP-


General information:
TITO was launched using:
RESULT:

Template: 3FF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25292 for 1038 contacts (-24.4/contact) +
2D Compatibility (PS) -17161 + (NN) -9221 + (LL) 120
1D Compatibility (HY) -20400 + (ID) 7300
Total energy: -79254.0 ( -76.35 by residue)
QMean score : 0.574

(partial model without unconserved sides chains):
PDB file : Tito_3FF0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FF0-query.scw
PDB file : Tito_Scwrl_3FF0.pdb: