Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTPEDCTGLADIREAIDRIDLDIVQALGRRMDYVKAASRFKASEAAIPAPERVAAMLPERARWAEENGLDAPFVEGLFAQIIHWYIAEQIKYWRQTRGAA
2H9D Chain:D ((1-100))
MKTPEDCTGLADIREAIDRIDLDIVQALGRRMDYVKAASRFKASEAAIPAPERVAAMLPERARWAEENGLDAPFVEGLFAQIIHWYIAEQIKYWRQTRGA-
General information:
TITO was launched using:
RESULT:
Template:
2H9D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24051 for 567 contacts (-42.4/contact) +
2D Compatibility (PS) -11145 + (NN) -6497 + (LL) 144
1D Compatibility (HY) -12800 + (ID) 5000
Total energy: -59349.0 ( -104.67 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_2H9D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H9D-query.scw
PDB file :
Tito_Scwrl_2H9D.pdb
: