Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSSRPYLVRALYEWIVDNDCTPHILVNAEFAGVKVPPGYASDGQIVLNVSPSAVRHLHMDNEAVSFEGRFGGVAQSLYIPALAVMAIYARENGQGMVFDLEQPGPVDDEPGDDDGGPSDEPPRPSGRPSLKVVK
1OU8 Chain:B ((8-107))
---KRPYLLRAYYDWLVDNSFTPYLVVDATYLGVNVPVEYVKDGQIVLNLSASATGNLQLTNDFIQFNARFKGVSRELYIPMGAALAIYARENGDGVMFEPEE--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1OU8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95855 for 682 contacts (-140.5/contact) +
2D Compatibility (PS) -10841 + (NN) -3495 + (LL) -1132
1D Compatibility (HY) -12400 + (ID) 2650
Total energy: -126373.0 ( -185.30 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_1OU8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OU8-query.scw
PDB file :
Tito_Scwrl_1OU8.pdb
: