Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFVNTLPLIFGLTAALGSSMALALPSDREQPIRVQADSAELDDKQGVAVYRGDVVVTQGSTKLTGNTVTLKQDKNGDIEVVTSVGKPAYYEQKPAPDKDVTKAYGLTIQYFVTQNRVVLIDQAKVIQEGNTFEGEKIVYDTQRQIVNAGRATGSQVTSPRPRIDMVIQPKKKAQ
4UU4 Chain:A ((26-170))
-------------------------PSDREQPIRVQADSAELDDKQGVAVYRGDVVVTQGSTKLTGNTVTLKQDKNG--EVVTSVGKPAYYEQKPAPDKDVTKAYGLTIQYFVTQNRVVLIDQAKVIQEGNTFEGEKIVYDTQRQIVNAGRATGSQVTSPRPRIDMVIQP-----
General information:
TITO was launched using:
RESULT:
Template:
4UU4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36098 for 1052 contacts (-34.3/contact) +
2D Compatibility (PS) -16626 + (NN) -13235 + (LL) 2876
1D Compatibility (HY) -16400 + (ID) 7150
Total energy: -86633.0 ( -82.35 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_4UU4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UU4-query.scw
PDB file :
Tito_Scwrl_4UU4.pdb
: