Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLDAYDHRILAALQRDGRLSNVQLAEEIGLSPSPCLRRVRLLEEAGVIRGYQASIDRDEVGLGLTVFVGIKVERHRQEQAEAFHRAVVDLPEVISVHLVSGESDFLLQVVVPDLRAYERLLSETLLRLPGVSDIRSNFAIKTVKAPAPLPLGHLAG
2P5V Chain:D ((6-159))
LTLDKTDIKILQVLQENGRLTNVELSERVALSPSPCLRRLKQLEDAGIVRQYAALLSPESVNLGLQAFIRVSI-RKAKDAREDFAASVRKWPEVLSCFALTGETDYLLQAFFTDMNAFSHFVLDTLLSHHGVQDAQSSFVLKEIKHTTSLPLNHL--
General information:
TITO was launched using:
RESULT:
Template:
2P5V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115223 for 980 contacts (-117.6/contact) +
2D Compatibility (PS) -16986 + (NN) -7478 + (LL) 76
1D Compatibility (HY) -16800 + (ID) 3300
Total energy: -159711.0 ( -162.97 by residue)
QMean score : 0.705
(partial model without unconserved sides chains):
PDB file :
Tito_2P5V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P5V-query.scw
PDB file :
Tito_Scwrl_2P5V.pdb
: