Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMPNLTLADLQGEIQANVRTALAEDVGG-----GDLTAQLIDPQREAEARVITREHATIAGRAWVDEVFRQVDPRVLVTWQVEDGQRVEPNQMLFQLKGPARALLTGERSALNFLQLLSGTATRSQHYADLVAGTAVKLLDTRKTLPGLRLAQKYAVTCGGCHNHRIGLYDAFLIKENHIAACGGIDRAIAEARRIAPGKPVEVEVENLDELRQALEAGADIVMLDELSLDDMRTAVALTAGRAKLEASGGINEGTLRNIAETGVDYISIGTLTKDVRAVDLSMRLTL
3PAJ Chain:A ((14-295))----LKQQLPADITRSVIDTLKEDLGGTLDPAADITASLIPADRISTATIITREAGVFCGQLWADEVFKQLGGQVSIEWHVQDGDTLTPNQTLCTLTGPARILLTGERNAMNFIQTLSGCATATARYVQELKGTQCRLLDTRKTIPGLRSALKYAVACGGGYNHRIGVFDAYLIKENHIIACGGIRQAISTAKQLNPGKPVEVETETLAELEEAISAGADIIMLDNFSLEMMREAVKINAGRAALENSGNITLDNLKECAETGVDYISVGALTKHLKALDLSMRFK-


General information:
TITO was launched using:
RESULT:

Template: 3PAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -159651 for 2276 contacts (-70.1/contact) +
2D Compatibility (PS) -30837 + (NN) -9831 + (LL) 340
1D Compatibility (HY) -27600 + (ID) 7750
Total energy: -235329.0 ( -103.40 by residue)
QMean score : 0.581

(partial model without unconserved sides chains):
PDB file : Tito_3PAJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PAJ-query.scw
PDB file : Tito_Scwrl_3PAJ.pdb: