Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLRSVIAADHPALFALWSRTPGIRLRAEDAYPFFLAYLQRNPGLSLLVETEGEVIACLMAGHDGRRGYLQHLVVDPGYRGLGLARRMLDEVLARLAREGIGKSHVFVLDAAEEAQAFWRAQSDWERRKDIQVFSTREGHA
4UBR Chain:C ((1-137))
MQLRSVIAADHPALFALWSRTPGIRLRAEDAYPFFLAYLQRNPGLSLLVETEGEVIACLMAGHDGRRGYLQHLVVDPGYRGLGLARRMLDEVLARLAREGIGKSHVFVLDAAEEAQAFWRAQSDWERRKDIQVFSTR----
General information:
TITO was launched using:
RESULT:
Template:
4UBR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96100 for 924 contacts (-104.0/contact) +
2D Compatibility (PS) -15358 + (NN) -12930 + (LL) 120
1D Compatibility (HY) -19600 + (ID) 6850
Total energy: -150718.0 ( -163.11 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_4UBR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UBR-query.scw
PDB file :
Tito_Scwrl_4UBR.pdb
: