Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANTPSAKKRAKQAEKRRSHNASLRSMVRTYIKNVVKAIDAKDLEKAQAAFTAAVPVIDRMADKGIIHKNKAARHKSRLSGHIKALSTAAA
4GKJ Chain:T ((4-89))-----SALKRHRQSLKRRLRNKAKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEAAG


General information:
TITO was launched using:
RESULT:

Template: 4GKJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26416 for 558 contacts (-47.3/contact) +
2D Compatibility (PS) -9389 + (NN) -4921 + (LL) 184
1D Compatibility (HY) -400 + (ID) 1600
Total energy: -42542.0 ( -76.24 by residue)
QMean score : 0.794

(partial model without unconserved sides chains):
PDB file : Tito_4GKJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GKJ-query.scw
PDB file : Tito_Scwrl_4GKJ.pdb: