Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHKKAGGSTRNGRDSESKRLGVKLFGGQAVKAGNILVRQRGTKFHAGYGVGLGKDHTLFAKVDGVVKFETKGAFGRKYVSIVAA
1Y69 Chain:U ((2-84))
-AHKKGVGSSKNGRDSNPKYLGVKKFGGEVVKAGNILVRQRGTKFKAGQGVGMGRDHTLFALSDGKVVFINKGK-GARFISIEAA
General information:
TITO was launched using:
RESULT:
Template:
1Y69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32723 for 471 contacts (-69.5/contact) +
2D Compatibility (PS) -8984 + (NN) -1626 + (LL) 340
1D Compatibility (HY) -4800 + (ID) 2850
Total energy: -50643.0 ( -107.52 by residue)
QMean score : 0.746
(partial model without unconserved sides chains):
PDB file :
Tito_1Y69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y69-query.scw
PDB file :
Tito_Scwrl_1Y69.pdb
: