Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTMRGWILAGLLLAALAAQAGEVHGVEVEARLRDYFFDAARRGDQAMLKEFVEAGFDLDVQDAKGYTALILAAYHGHGGAVEQLLEAGADPCVQDARGNTALMGAIFKGEVRIARRLIGAQCSPDQRNGAGQTAAMYAALFKREELLQALSARGADLGARDALGNSVESLRRGELNGTAAAR
3Q9N Chain:D ((10-138))
------------------------------------LLEAAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALG------------------
General information:
TITO was launched using:
RESULT:
Template:
3Q9N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61606 for 1071 contacts (-57.5/contact) +
2D Compatibility (PS) -14919 + (NN) -15505 + (LL) 4600
1D Compatibility (HY) -5200 + (ID) 2200
Total energy: -94830.0 ( -88.54 by residue)
QMean score : 0.821
(partial model without unconserved sides chains):
PDB file :
Tito_3Q9N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q9N-query.scw
PDB file :
Tito_Scwrl_3Q9N.pdb
: