Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSPHLERGGLPIREVTRLTGVHPVTLRAWERRYGLVVP-QRTGKGHRLYSEEQVERIRRILVWLERGVAISQVRALLERPEETPAADVESPWERLHEQLLDAIAALAERRLDDLFNQAASLYPVATLCEKLLQPLLQHLERRWQGQFGARMERAFFFSWLRSKLGARLYHQQRLQQGAPLLLVNQSELSLEPNLWLCSWLLGSGEVPLQVFDWPLPPAELALACERLEARGVLLYASHRLNPEHLPRLLAGVSCPVVLVGPAVEIQREAFETLALTGLLLASTPLEARRLLGERGLLNP |
2VZ4 Chain:A ((4-93)) | ------------VGQVAGFAGVTVRTLHHYDD-IGLLVPSERSHAGHRRYSDADLDRLQQILFYRELGFPLDEVAALL----DD-----RAHLRRQHELLSARIGKL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VZ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53530 for 502 contacts (-106.6/contact) +
2D Compatibility (PS) -9459 + (NN) -5422 + (LL) 16008
1D Compatibility (HY) -8400 + (ID) 1500
Total energy: -62303.0 ( -124.11 by residue)
QMean score : 0.725
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