Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRDLTDDVALMRPVIDALRASGCDPDRVLVRVGLPPGGLPAGRFPHSAQNLFWKAAADECGEEHVGLHLAEHLPAFHGLLLEYLFLSSDTFGAGLRHSLRYVRLLSDTLQAQLEVEGERAVLSLGESPAINRHFPEMLAGAVIRLFGALTEGEFKPLEVQLMNETGAPMERYRAVYGCPTILGMPRYALVFDAAVLDKPSRHAAPELLRMHESLARRQLAEVERLDLVRQVRELIG-ELLVDGGATLEQVAARLGMPARRLRERLAMA-GVRFNDLVTDYRCRLAKELLLKTDERIEVIVERTGFSEPSTFYRAFKRWVGETPVEFRRRGQQGRG |
3OOU Chain:A ((4-107)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPIIQNVLSYITEHF--SEGMSLKTLGNDFHINAVYLGQLFQKEMGEHFTDYLNRYRVNYAKEELLQTKDNLTIIAGKSGYTDMAYFYRQFKKHTGETPNRYRKIH----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OOU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48797 for 684 contacts (-71.3/contact) +
2D Compatibility (PS) -11399 + (NN) -7485 + (LL) 16316
1D Compatibility (HY) -8000 + (ID) 1450
Total energy: -60815.0 ( -88.91 by residue)
QMean score : 0.780
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