Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKNKTFLAAALVALAASFPVHAATDYTRTRYPIVLSHGLFGFKSVGPVDYWHAIVPALEKDGAKVFATSQSPVNSNEVRGEQLLAQVEEVLALTGAEKVNLIGHSQGGMTVRYVAGVAPQLVASVTTMGTPHKGTPVADAVTGFSEFLGPIGTEVIASAVEALFSVVDIVDGGEWVKGDALAALNSLNTPGTARFNQRFPQAIPASACGQGAETVAGVRYYSMSG------TGSLTNALDPSSAGLAVTGLLFGEA-NDGLVGQCSSHLGSVVKDNYRMDHLDEVNQLLGLVSLFESDPTQVYRQHANRLRNVGL |
4HS9 Chain:A ((23-302)) | -----------------------------TKYPIVLVHGLAGFSEIVGFPYFYGIADALTQDGHQVFTASLSAFNSNEVRGKQLWQFVQTILQETQTKKVNFIGHSQGPLACRYVAANYPDSVASVTSINGVNHGSEIADLYRRIIR-KDSIPEYIVEKVLNAFGTIISTFSGHRGDPQDAIAALESLTTEQVTEFNNKYPQALPKTPCGEGDEIVNGVHYYCFGSYIQELIAGENGNLLDPTHAAMRVLNTLFTEKQNDGLVGRCSMRLGKLIKDDYAQDHFDMVNQVAGLVS-YNENIVAIYTLHAKYL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80124 for 2436 contacts (-32.9/contact) +
2D Compatibility (PS) -28696 + (NN) -6553 + (LL) 3176
1D Compatibility (HY) -24400 + (ID) 5900
Total energy: -142497.0 ( -58.50 by residue)
QMean score : 0.488
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