Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRGDKSKYSDKQQRKAEHIEESYKAKGVSESEAEARAWATVNKQSGGGERKGGSGRAKSETAKRADRKDSAHRAAQARSGRPANRGSASRGKRQGSTSVSEMTREELMQLARKRDIRGRSTMRKAELIEALSRA
2KVU Chain:A ((24-58))
-------------------------------------------------------------------------------------------------ANLDDMKVAELKQELKLRSLPVS--GTKTELIERLRA-
General information:
TITO was launched using:
RESULT:
Template:
2KVU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11388 for 191 contacts (-59.6/contact) +
2D Compatibility (PS) -3983 + (NN) -2943 + (LL) 3984
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -16480.0 ( -86.28 by residue)
QMean score : 0.709
(partial model without unconserved sides chains):
PDB file :
Tito_2KVU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KVU-query.scw
PDB file :
Tito_Scwrl_2KVU.pdb
: