Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQPAHLNINSLEIMPVSQSWAGFAIHRES
2NWQ Chain:A ((21-269))
-SSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCE--------------------GAHPIQPEDIAETIFWIMNQPAHLNINSLEIMPVSQSWAGFAIH---
General information:
TITO was launched using:
RESULT:
Template:
2NWQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131026 for 1899 contacts (-69.0/contact) +
2D Compatibility (PS) -24765 + (NN) -10008 + (LL) 1476
1D Compatibility (HY) -30800 + (ID) 11450
Total energy: -206573.0 ( -108.78 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_2NWQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NWQ-query.scw
PDB file :
Tito_Scwrl_2NWQ.pdb
: