Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLNLLRERYRVDLASLQATCEANYARLMRLLPDMREAQASRRVALSEGERLLGVLALEVTEACPYTTTLQVRQELGLPWLPAPRLEVRVYHDARM-AEVIGA---EQARRLMAIYPYPNQAMHQPDEKNQLNLFLGEWLAHCLACGHEMEPVAQR
2IW3 Chain:A ((336-412))
----------------------------------------------------------ELSHAGDVSTTLQVVNELLKDETVAPRFKIVVEYIAAIGADLIDERIIDQQAWFTHITPYMTIFLHEKKAKDILDEF---------------------
General information:
TITO was launched using:
RESULT:
Template:
2IW3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14447 for 460 contacts (-31.4/contact) +
2D Compatibility (PS) -7822 + (NN) -3994 + (LL) 7304
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: -23759.0 ( -51.65 by residue)
QMean score : 0.281
(partial model without unconserved sides chains):
PDB file :
Tito_2IW3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IW3-query.scw
PDB file :
Tito_Scwrl_2IW3.pdb
: