Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYLETPKKFRSLANQAHQVAENYFRPISRKYD-KAEHAYP-----KELDLLAALLDGMNSGSPEAVGATSASKRAGKQVEEGIKNGGNLSALLGVMELCWGDVGLLLAMPRQGLGNAAIAAVANEEQLQRF------GGTWAAMAITEPGCGSDSAAIRTTATQDGDHYVLNGEKIFVTSGERADAVVVWATLNRNLGRAAIKSFVVEKGTPGMTVTRLEKKLGIKASDTASISFNDCRVPAANLLGNAEVDVQKGFAGVMETFDNTRPLVAGMAVGVAKAALDRTRELLKKAGCKFDYRKPLLTVSHAEATLYRLEAEWEAARLLTLKAAWMADNKLPNSKEASIAKAKAGRVANEITLKCVELAGALGYAEDELLEKWARDSKILDIFEGTQQIQLLIVARRLLGKSSSQLK |
| 1UKW Chain:B ((10-377)) | ---------RQLQALARRFAKEVILPVAQEYDEKEEVPWPVIEKLHEVGLLNAII-------PEEYGGM------------GLKM---LDEVIVGEELAYACMGIYTIPMASDLGITPVLLAGTEEQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDHYVLNGTKMWISNGGEAEWVVVFATVNPELRHKGVVALVVERGTPGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLG----EEGEGFKIAMQTLNKTRIPVAAGSVGVARRALDEARKYAKE---REAFGEPIANFQAIQFKLVDMLIGIETARMYTYYAAWLADQGLPHAHASAIAKAYASEIAFEAANQAIQIHGGYGYVREFPVEKLLRDVKLNQIYEGTNEIQRLIIARHIL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149627 for 3186 contacts (-47.0/contact) +
2D Compatibility (PS) -38778 + (NN) -17679 + (LL) 1344
1D Compatibility (HY) -26800 + (ID) 6800
Total energy: -238340.0 ( -74.81 by residue)
QMean score : 0.516
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