Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPALRSLIAILFLGLCLASPPLLAQSEPPSAEAVQQSLDKLAERKLAEADQKVAKASLEQTLKFLAARDEALQSLEDLKKRLSDAPRQIEENQRELERLKKTKERPVSERYSGESAARLEMLLNDRTTQQAEWQKALGEANSLSITAETRPERAQAGISSMQARILEIGSLLKAGKESGKTINADRRGELLAEQAALTVQSQLLRQELAGNNLLQDLGKSQHDLLTEKISRLEKETLDLQALISEKRREQSEKTVAELSKEGAQGAGTDSLLSQENAKNLRLSDYLLRATDRLNVLTRRNLETKQQLDNLTQSNQALEEQINVLRGSLLLSRILYKQKQALPKIKADQSLADEIADLRLGQFELNQERDKLATPQQYLDDLLAQQPSEQVTPELRKDLDTLLATRSELLERLNHELNALLNEAITLQLNQKQLLSTSESLRTTLDEQMFWIPSNQPLDLSWFKMTPTLLKNQLTEIPWGSGVRELGEGLVDRPLLFLPLFLLIAALLWKRRYLYDKLAELNDDIGHFKRDSQLHTPLAILITILLALPGTLTFAVAGLALLLDARGQNATLGSALLEMAQVWLLFYTAHRILTPGGIAERHFHWSREQVGFLDRHLVRLGVVVLALVGVVTVAEHQPASLADDVIGIAVVLLGYAAMAWLLSRLLFSSPGDERPSLIKMIVGILFTALPLVLFVAVCFGYYYTSLKLTDRLIDTLYLLLLWFVIEAAFVRGLGVAARRLAYARALAKRQNAAKEGVDGETNVEEPTLGIEQINQQSLRLIRLALLIGFIVCLYWVWADLISVISYLDNVTLYQYTAGTGEAATSVPISLRDFLAALAIAVVTVALARNLPGLLEVLVLQRLTLAQGSAYATTTLLSYAISGIGIVSALSTLGVSWDKLQWLVAALSVGLGFGLQAIFSNFVSGLIILFERPVRIGDVVTIGNLSGTVSRIRIRATTITDFDRKEIIVPNQTFITGQLVNWSLSDTVTRVTIKIGLAYETDLPLARKLMMQAVKENPRVLRDPEPLLYFLTISASTFDYELRFHVRELGDRNPSTDEILTKIATSFREHKIDMAFNQVDVFVKNLQGQQVQLFVGEPQHSGVGNPPALKGQDGPAEPTR |
2VV5 Chain:A ((25-280)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISR-KIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFS-REPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNS-GDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137220 for 1664 contacts (-82.5/contact) +
2D Compatibility (PS) -27200 + (NN) -6412 + (LL) 70304
1D Compatibility (HY) -25600 + (ID) 3500
Total energy: -129628.0 ( -77.90 by residue)
QMean score : 0.349
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