Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAERKTLLLTGASRGIGHATVKYFNAAGWRVFTASRQSWASECPWADGEENHIHLDLEDIPGVEASLELIREKL--GDGRLHALVDNAGISPKGEGGERLGVLETDYATWLRVFNVNLFSTALLARGLFAELKAAQGTVINVTSIAGSKVHPFAGVAYATSKAALSALTREMAHDFGPHGVRVNAIAPGEIDTSILSPGTEEIVERSIPLHRLGRPEEIASLIYFLCTSGASYVNGAEIHVNGGQHV
4X54 Chain:A ((34-271))
---RKTLVLTGASRGIGHATVKRFSLAGWRVITCSRQD---------GPEDHIKVDLSDPEDIGKAIAEIRRRLEANGSKLHALVNNAGISPKAEGGRRMNSIETPMAVWRDVFQVNFMAPIMLARGLFKELEAAQGSVVNVTSIAGSRVHPFAGTAYATSKAALAALTREMASDFGPYGIRVNAIAPGEIDTAILS----------------GKTSEVAETIYFLCTETSSYVTGSEIHIN-----
General information:
TITO was launched using:
RESULT:
Template:
4X54.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124362 for 1824 contacts (-68.2/contact) +
2D Compatibility (PS) -23251 + (NN) -12103 + (LL) 2064
1D Compatibility (HY) -21600 + (ID) 7100
Total energy: -186352.0 ( -102.17 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_4X54.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4X54-query.scw
PDB file :
Tito_Scwrl_4X54.pdb
: