Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGWRLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSKPAARLGLERLDRYWPQPPQQTWCSVGAATAAILEAYGLDVTYPEQGDDSEALLALPAFQDSLRVHDPKVLIMRGEGGREFLAERLRGQGVQVDYLPLYRRRAPDYPAGELLARVRAERLNGLVVSSGQGLQNLYQLAAADWPEIGRLPLFVPSPRVAEMARELGAQRVIDCRGASAPALLAALTSAA
4ES6 Chain:A ((6-254))
--GWRLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSKPAARLGLERLDRYWPQPPQQTWCSVGAATAAILEAYGLDVTYPEQGDDSEALLALPAFQDSLRVHDPKVLIMRGEGGREFLAERLRGQGVQVDYLPLYRRRAPDYPAGELLARVRAERLNGLVVSSGQGLQNLYQLAAADWPEIGRLPLFVPSPRVAEMARELGAQRVIDCRGASAPALLAALTSAA
General information:
TITO was launched using:
RESULT:
Template:
4ES6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -193308 for 2086 contacts (-92.7/contact) +
2D Compatibility (PS) -28035 + (NN) -19797 + (LL) 180
1D Compatibility (HY) -33200 + (ID) 12450
Total energy: -286610.0 ( -137.40 by residue)
QMean score : 0.668
(partial model without unconserved sides chains):
PDB file :
Tito_4ES6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ES6-query.scw
PDB file :
Tito_Scwrl_4ES6.pdb
: