Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGVGKIDFEMIEIA
2V3B Chain:B ((1-53))
MRKWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGVGKIDFEMIE--
General information:
TITO was launched using:
RESULT:
Template:
2V3B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17842 for 318 contacts (-56.1/contact) +
2D Compatibility (PS) -5464 + (NN) -3219 + (LL) 348
1D Compatibility (HY) -9200 + (ID) 2650
Total energy: -38027.0 ( -119.58 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_2V3B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V3B-query.scw
PDB file :
Tito_Scwrl_2V3B.pdb
: