Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDTLLPVLLFAALALAVLGAAKRFLMWRRGRPAKVDWIGGLLQMPRRYLVDLHHVVERDRYMSRTHVATAGGFVLAALLAILVHGFGLHGRILGFALLAATALMFVGALFVARRRLDPPSRLSKGPWMRLPKSLLAFAASFFLATLPVAGILPEGFGGWFLAGLLAIGVAWGVSELFLGMTWGGPMKHAFAGALHLAWHRRAERFGGGRSTGLKALDLADPQAPLGVEKPSDFTWNQLLGFDACVQCGKCEAMCPAFAAG--QPLNPKKLIQDMVIGLAGGNDAKFAGSPYPGKPLGEHGGGPHQPIVALDGKALVDADTLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPNKGAEVLDNLIATDNPGGFAPGGRLNWAADLNLPLMSEKKSADVLFWVGDGAFDMRNQRTLRAFVKILKAAAVDFAVLGLEERDSGDVARRLGDEATFQNLARRNIATLAKYRFTRIVSCDPHSFHVLKNEYGALGGDYQVLHHSTFIDELLRAGTLQPGRSKAGSVTYHDPCYLGRYNGEYEAPRNVLRALGIEVKEMQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMADIRETGAELVAVGCPQCTAMLEGVVAPRPEIKDIAELVAEALIEQAEAPAKKPLRREAVAEVH |
2H88 Chain:B ((151-244)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSR----------DD--------YTEERL-----AQLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59027 for 664 contacts (-88.9/contact) +
2D Compatibility (PS) -9256 + (NN) -1858 + (LL) 36012
1D Compatibility (HY) -6400 + (ID) 1050
Total energy: -41579.0 ( -62.62 by residue)
QMean score : 0.429
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