Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNLILTAMLAMASLFGMAAQADDYTAGKEYVELSSPVPVSQPGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHKEHKKLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTMVVNGKYRFDIGSAGGPEETLKLADYLIEKERAAAKK
3H93 Chain:A ((1-192))
-------------------SNADDYTAGKEYVELSSPVPVSQPGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHKEHKKLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTMVVNGKYRFDIGSAGGPEETLKLADYLIEKERAAAKK
General information:
TITO was launched using:
RESULT:
Template:
3H93.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114806 for 1480 contacts (-77.6/contact) +
2D Compatibility (PS) -21145 + (NN) -12655 + (LL) 2320
1D Compatibility (HY) -26800 + (ID) 9500
Total energy: -182586.0 ( -123.37 by residue)
QMean score : 0.708
(partial model without unconserved sides chains):
PDB file :
Tito_3H93.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H93-query.scw
PDB file :
Tito_Scwrl_3H93.pdb
: