Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRLQPVRLVSFVTTDLAGITRGRSLPLATLEEQLASGCGWVPANSSLTPQDLIDESSPWGSHGDLRLLPDPNSRVRVEQGPDAAAPALDYLHGNLVETDGTPWPACPRSLLRAEVERYRDSGLQVIAAFEHEFSLLGLPGERPAAAFSLQAQRAAGQFPGWLVSALAQAGTEPEMFLPEYGQRQYEVTCRPAQGVAAADRAVNVREVTREVARQMGLRTCFAPLPAPGAVTNGVHLHLSLQHADGSPLLYEPGRPNDLSELGEHWAAGVLAHLPALCALTAPTAASYLRLKPHHWSAAYACLGLRNREAALRICPVVSVGGKPLGKQYNLEFRPMDATTCPHLAMAAVLIAGRLGIERRLPLRALADVDPHGLSDEERQARGIQALPATLGDALDCLQRDEALCAELPKPLLDTYLAMKRHELALTAGLSDDDLCRHYAELY |
| 4HPP Chain:A ((1-443)) | MNRLQPVRLVSFVTTDLAGITRGRSLPLATLEEQLASGCGWVPANSSLTPQDLIDESSPWGSHGDLRLLPDPNSRVRVEQGPDAAAPALDYLHGNLVETDGTPWPACPRSLLRAEVERYRDSGLQVIAAFEHEFSLLGLPGERPAAAFSLQAQRAAGQFPGWLVSALAQAGTEPEMFLPEYGQRQYEVTCRPAQGVAAADRAVNVREVTREVARQMGLRTCFAPLPAPGAVTNGVHLHLSLQHADGSPLLYEPGRPNDLSELGEHWAAGVLAHLPALCALTAPTAASYLRLKPHHWSAAYACLGLRNREAALRICPVVSVGGKPLGKQYNLEFRPMDATTCPHLAMAAVLIAGRLGIERRLPLR-----------------RGIQALPATLGDALDCLQRDEALCAELPKPLLDTYLAMKRHELALTAGLSDDDLCRHYAELY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204561 for 3705 contacts (-55.2/contact) +
2D Compatibility (PS) -45932 + (NN) -30062 + (LL) 880
1D Compatibility (HY) -54400 + (ID) 21300
Total energy: -355375.0 ( -95.92 by residue)
QMean score : 0.536
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