Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTPVVLITGAAGGLGRAIAKRFAQSHWRIAATDVDKEGLHALNAQVP---LDASGVA-DLRSADNCHTLMSKILARTGRLDALVNAAGVWREGPVENFTEEDFDLVLGVNLKASFYMCQAAIPYLKENQ-GSIVNISSDSGRQAYRGSAAYCASKAALTMLSKTLALELAEQGVRVNAVSPADIATPMLDYQAERYGMGNPDGYKRALLKDYPQGKAARFIRPEEVAELVWYLCGPQAEAITGADLAVDFGLSAGR
2C07 Chain:A ((44-284))
--NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISS-----ISEQ--------IKKNIISNIPAG---RMGTPEEVANLACFLSSDKSGYINGRVFVIDGGLS---
General information:
TITO was launched using:
RESULT:
Template:
2C07.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143223 for 1968 contacts (-72.8/contact) +
2D Compatibility (PS) -25213 + (NN) -13056 + (LL) 352
1D Compatibility (HY) -16400 + (ID) 3850
Total energy: -201390.0 ( -102.33 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_2C07.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C07-query.scw
PDB file :
Tito_Scwrl_2C07.pdb
: