Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site (All) Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
50050_tI_WHEAT9 65% 0.484 0.489 PF00234 C2_S11 - (0)- - / 1 / - -
51051_tI_WHEAT9 66% 0.460 0.457 PF00234 C2_S11 - (0)- - / - / 1 -
52052_tI_WHEAT9 77% 0.529 0.566 PF00234 C2_S14 - (0)- - / 2 / 2 -
53053_tI_WHEAT10 80% 0.631 0.577 PF00234 C2_S14 - (0)- - / 1 / 3 -
54054_tI_WHEAT9 76% 0.558 0.558 PF00234 C2_S14 - (0)- - / 2 / 2 -
55055_tI_WHEAT8 40% 0.473 0.474 PF00234 0 - (0)- - / - / - -
56056_tI_WHEAT8 41% 0.522 0.524 PF00234 0 - (0)- - / - / - -
57057_tI_WHEAT8 51% 0.615 0.615 PF00234 C2_S12 - (0)- - / - / 2 -
58058_tI_WHEAT7 48% 0.617 0.603 PF00234 C2_S11 - (0)- - / - / 1 -
59059_tI_ORYSA8 42% 0.548 0.551 PF00234 1 - (0)- - / - / - -
60060_tI_ORYSA8 49% 0.542 0.524 PF00234 C4_S13 - (0)- - / - / 3 -
61061_tI_ORYSA11 40% 0.437 0.454 PF00234 0 - (0)- - / - / - -
62062_tI_ORYSA8 54% 0.446 0.538 PF00234 C3_S12 - (0)- - / - / 2 -
63063_tI_ORYSA9 35% 0.383 0.473 PF00234 0 - (0)- - / - / - -
64064_tI_ORYSA10 40% 0.603 0.591 PF00234 0 - (0)- - / - / - -
65065_tI_ORYSA10 60% 0.590 0.647 PF00234 C4_S12 - (0)- - / - / 2 -
66066_tI_ORYSA9 63% 0.561 0.560 PF00234 C3_S13 - (0)- - / - / 3 -
67067_tI_ORYSA9 76% 0.558 0.558 PF00234 C2_S14 - (0)- - / 2 / 2 -
68068_tI_ORYSA10 80% 0.631 0.577 PF00234 C2_S14 - (0)- - / 1 / 3 -
69069_tI_ORYSA9 64% 0.444 0.464 PF00234 C2_S14 - (0)- - / 2 / 2 -
70070_tI_ORYSA10 60% 0.473 0.473 PF00234 C1_S15 - (0)- - / - / 5 -
71071_tI_ORYSA10 78% 0.583 0.584 PF00234 C3_S14 - (0)- - / 1 / 3 -
72072_tI_ORYSA11 80% 0.593 0.551 PF00234 C2_S14 - (0)- - / 1 / 3 -
73073_tI_ORYSA9 77% 0.529 0.566 PF00234 C2_S14 - (0)- - / 2 / 2 -
74074_tI_ARATH10 36% 0.433 0.434 PF00234 0 - (0)- - / - / - -
75075_tI_ARATH8 40% 0.664 0.622 PF00234 0 - (0)- - / - / - -
76076_tI_ARATH8 57% 0.478 0.567 PF00234 C3_S12 - (0)- - / - / 2 -
77077_tI_ARATH9 57% 0.530 0.588 PF00234 C2_S14 - (0)- - / 1 / 3 -
78078_tI_ARATH8 45% 0.544 0.555 PF00234 C2_S12 - (0)- - / - / 2 -
79079_tI_ARATH9 53% 0.657 0.657 PF00234 C2_S12 - (0)- - / - / 2 -
80080_tI_ARATH8 49% 0.542 0.542 PF00234 C2_S12 - (0)- - / - / 2 -
81081_tI_ARATH8 47% 0.775 0.715 PF00234 1 - (0)- - / - / - -
82082_tI_ARATH8 48% 0.352 0.386 PF00234 1 - (0)- - / - / - -
83083_tI_ARATH10 63% 0.582 0.604 PF00234 C5_S13 - (0)- - / - / 3 -
84084_tI_ARATH10 57% 0.577 0.579 PF00234 C2_S12 - (0)- - / - / 2 -
85085_tII_WHEAT12 100% 0.573 0.608 PF00234 C4_S11 - (0)- - / - / 1 -
86086_tII_WHEAT12 97% 0.625 0.691 PF00234 C5_S11 - (0)- - / 1 / - -
87087_tII_WHEAT12 97% 0.643 0.663 PF00234 C2_S11 - (0)- - / 1 / - -
88088_tII_WHEAT12 99% 0.602 0.625 PF00234 C4_S11 - (0)- - / - / 1 -
89089_tII_WHEAT11 77% 0.645 0.645 PF00234 C5_S11 - (0)- - / 1 / - -
90090_tII_WHEAT12 78% 0.572 0.614 PF00234 C3_S11 - (0)- - / 1 / - -
91091_tII_WHEAT12 99% 0.634 0.644 PF00234 C4_S11 - (0)- - / 1 / - -
92092_tII_WHEAT12 99% 0.625 0.642 PF00234 C2_S11 - (0)- - / - / 1 -
93093_tII_WHEAT12 75% 0.586 0.610 PF00234 C1_S11 - (0)- - / 1 / - -
94094_tII_WHEAT12 73% 0.569 0.567 PF14368 C3_S11 - (0)- - / 1 / - -
95095_tII_WHEAT12 75% 0.585 0.636 PF00234 C2_S11 - (0)- - / 1 / - -
96096_tII_WHEAT12 75% 0.593 0.619 PF00234 C3_S11 - (0)- - / - / 1 -
97097_tII_WHEAT12 50% 0.667 0.669 PF00234 0 - (0)- - / - / - -
98098_tII_WHEAT12 49% 0.596 0.601 PF00234 0 - (0)- - / - / - -
99099_tII_WHEAT12 51% 0.667 0.711 PF00234 0 - (0)- - / - / - -
100100_tII_WHEAT12 53% 0.541 0.541 PF00234 C4_S11 - (0)- - / - / 1 -

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