Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




 Query Sequence
Filter: 		Significants
SA found		 Seq Ident. 3D Core
(QMean Score)		 Modeller
(QMean Score)		 Classification code

 Binding Site (All) Ligands Found
(Procognate)		 Profile Complexes by comparative docking
(ligands from PDB templates)

 Targets
for screening


Sort by entries

 [Nb of SA]
 [Best Ident]
 [Best Score]
 [Best Score]
 Main Code
 [Name]
 [Number]
 [Number]
 Distribution of CDocking pKd
 [Number]
1800_tI_ARATH8 31% 0.412 0.497 PF00234 0 - (0)- - / - / - -
2799_tIV_ARATH13 37% 0.403 0.476 PF00234 0 - (0)- - / - / - -
3798_tI_ARATH7 31% 0.362 0.433 PF00234 C2_S12 - (0)- - / - / 2 -
4797_tII_ARATH10 43% 0.501 0.503 PF00234 0 - (0)- - / - / - -
5796_tII_ARATH11 39% 0.522 0.507 PF00234 0 - (0)- - / - / - -
6795_tII_ARATH12 45% 0.504 0.585 PF00234 0 - (0)- - / - / - -
7794_tII_ARATH6 33% 0.577 0.614 PF14368 0 - (0)- - / - / - -
8793_tII_ARATH1 28% 0.357 0.338 PF14368 0 - (0)- - / - / - -
9792_tII_ARATH6 29% 0.380 0.453 PF14368 0 - (0)- - / - / - -
10791_tII_ARATH8 35% 0.493 0.494 PF00234 0 - (0)- - / - / - -
11790_tII_ARATH8 23% 0.346 0.483 PF00234 0 - (0)- - / - / - -
12789_tII_ARATH12 38% 0.655 0.653 PF00234 0 - (0)- - / - / - -
13788_tI_MEDTR8 50% 0.612 0.615 PF00234 C2_S11 - (0)- - / - / 1 -
14787_tI_MEDTR8 50% 0.447 0.479 PF00234 1 - (0)- - / - / - -
15786_tI_MEDTR8 43% 0.646 0.618 PF00234 1 - (0)- - / - / - -
16785_tI_MEDTR8 43% 0.577 0.577 PF00234 0 - (0)- - / - / - -
17784_tI_MEDTR10 44% 0.621 0.607 PF00234 1 - (0)- - / - / - -
18783_tI_MEDTR8 38% 0.550 0.606 PF00234 0 - (0)- - / - / - -
19782_tI_MEDTR8 48% 0.500 0.541 PF00234 C3_S12 - (0)- - / - / 1 -
20781_tI_MEDTR8 50% 0.513 0.532 PF00234 C4_S13 - (0)- - / - / 3 -
21780_tI_MEDTR8 33% 0.457 0.473 PF00234 0 - (0)- - / - / - -
22779_tI_MEDTR9 40% 0.726 0.763 PF00234 C1_S11 - (0)- - / - / 1 -
23778_tI_MEDTR7 41% 0.461 0.479 PF00234 1 - (0)- - / - / - -
24777_tI_MEDTR8 48% 0.612 0.668 PF00234 C2_S11 - (0)- - / - / 1 -
25776_tI_MEDTR8 51% 0.462 0.478 PF00234 C2_S12 - (0)- - / - / 2 -
26775_tI_MEDTR8 49% 0.546 0.547 PF00234 1 - (0)- - / - / - -
27774_tI_MEDTR9 65% 0.548 0.532 PF00234 C2_S14 - (0)- - / 1 / 3 -
28773_tI_MEDTR9 61% 0.653 0.622 PF00234 C2_S14 - (0)- - / 1 / 3 -
29772_tI_MEDTR8 56% 0.517 0.536 PF00234 C2_S13 - (0)- - / - / 3 -
30771_tI_MEDTR8 54% 0.632 0.632 PF00234 C2_S13 - (0)- - / - / 3 -
31770_tII_VITVI12 43% 0.857 0.837 PF00234 0 - (0)- - / - / - -
32769_tII_VITVI12 39% 0.692 0.708 PF00234 0 - (0)- - / - / - -
33768_tIV_VITVI17 44% 0.501 0.578 PF00234 C3_S11 - (0)- - / - / 1 -
34767_tII_VITVI12 44% 0.753 0.790 PF00234 0 - (0)- - / - / - -
35766_tI_VITVI9 49% 0.621 0.627 PF00234 C3_S12 - (0)- - / - / 1 -
36765_tI_VITVI8 47% 0.414 0.426 PF00234 1 - (0)- - / - / - -
37764_tV_VITVI11 29% 0.465 0.564 PF00234 0 - (0)- - / - / - -
38763_tI_VITVI11 34% 0.533 0.519 PF00234 0 - (0)- - / - / - -
39762_tV_VITVI7 33% 0.386 0.386 PF00234 0 - (0)- - / - / - -
40761_tII_VITVI12 43% 0.852 0.853 PF00234 0 - (0)- - / - / - -
41760_tXI_VITVI12 35% 0.419 0.415 PF00234 0 - (0)- - / - / - -
42759_tVI_VITVI10 27% 0.447 0.483 PF00234 0 - (0)- - / - / - -
43758_tVI_VITVI11 30% 0.412 0.434 PF00234 0 - (0)- - / - / - -
44757_tI_VITVI8 49% 0.548 0.562 PF00234 1 - (0)- - / - / - -
45756_tVI_VITVI11 27% 0.449 0.502 PF00234 0 - (0)- - / - / - -
46755_tI_VITVI9 32% 0.519 0.562 PF00234 0 - (0)- - / - / - -
47754_tI_VITVI10 60% 0.606 0.619 PF00234 C2_S12 - (0)- - / - / 2 -
48753_tI_VITVI6 41% 0.582 0.584 PF00234 0 - (0)- - / - / - -
49752_tI_VITVI9 32% 0.515 0.516 PF00234 0 - (0)- - / - / - -
50751_tIV_VITVI16 54% 0.579 0.601 PF00234 C3_S12 - (0)- - / 1 / 1 -

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