Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000817 (Listeria monocytogenes- Mars 2016)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
50Lmo026131 54% 0.556 PF00232 C1_S152 - (36)20 - / 1 / 17 9
51Lmo163140 41% 0.626 PF00591 C13_S173 - (1)20 - / 19 / 25 9
52Lmo136354 52% 0.535 PF00348 C1_S185 - (64)20 - / 1 / 41 9
53Lmo105185 62% 0.609 PF01327 C6_S1111 - (29)20 - / 19 / 42 9
54Lmo168552 50% 0.595 PF00202 C1_S197 - (41)19 - / - / 51 8
55Lmo023691 62% 0.635 PF02542 C10_S197 - (76)20 - / - / 72 8
56Lmo155352 71% 0.628 PF00202 C2_S1126 - (60)17 - / - / 50 8
57Lmo283123 52% 0.628 PF13419 C1_S135 - (12)13 - / 2 / 15 8
58Lmo182025 50% 0.472 PF00069 C2_S151 - (13)10 - / 8 / 7 8
59Lmo143734 63% 0.639 PF02774 C2_S164 - (35)20 12 / 11 / 15 8
60Lmo149724 49% 0.468 PF00485 C1_S154 - (36)14 3 / 10 / 8 7
61Lmo277461 39% 0.543 PF08402 C1_S154 - (0)14 - / 5 / 45 7
62Lmo274554 62% 0.450 PF00005 C3_S155 - (55)11 - / 32 / 9 7
63Lmo275260 53% 0.432 PF00005 C2_S154 - (54)11 - / 40 / 6 7
64Lmo219353 40% 0.419 PF00005 C1_S169 - (0)12 - / 3 / 35 7
65Lmo245754 65% 0.570 PF00121 C8_S137 - (29)14 - / - / 31 7
66Lmo177233 60% 0.424 PF01259 C2_S155 - (42)14 - / 13 / 16 7
67Lmo146342 63% 0.626 PF00383 C4_S143 - (26)15 - / - / 34 7
68Lmo010756 50% 0.443 PF00005 C2_S168 - (68)12 - / 38 / 5 7
69Lmo005541 77% 0.610 PF00709 C3_S171 - (53)18 - / 17 / 24 7
70Lmo187120 36% 0.544 PF00408 C1_S115 - (14)11 - / - / 10 7
71Lmo074447 48% 0.524 PF00005 C2_S138 - (0)12 - / 13 / 24 7
72Lmo247642 38% 0.458 PF01263 C2_S166 - (39)18 - / - / 20 7
73Lmo097545 50% 0.553 PF06026 C9_S140 - (16)16 - / - / 22 7
74Lmo155929 72% 0.507 PF07973 C4_S126 - (10)14 1 / 8 / 11 7
75Lmo210545 41% 0.551 PF07670 C5_S164 - (0)12 5 / 27 / 9 7
76Lmo193931 59% 0.646 PF02224 C1_S130 - (27)13 - / 14 / 10 6
77Lmo150424 49% 0.441 PF07973 C3_S123 - (21)13 1 / 4 / 8 6
78Lmo172235 39% 0.557 PF00271 C7_S141 - (0)12 - / 6 / 15 6
79Lmo260153 48% 0.474 PF00005 C1_S151 - (0)13 - / 14 / 20 6
80Lmo113240 37% 0.406 PF00005 C3_S146 - (45)10 - / 9 / 14 6
81Lmo098637 42% 0.382 PF00005 C1_S146 - (35)14 - / 4 / 13 6
82Lmo183849 58% 0.577 PF02729 C5_S147 - (35)18 - / 20 / 10 6
83Lmo218258 36% 0.465 PF00005 C1_S156 - (0)12 - / 10 / 32 6
84Lmo261199 72% 0.622 PF05191 C3_S1144 - (131)16 64 / 30 / 4 6
85Lmo093832 44% 0.633 PF01451 C8_S121 - (2)9 - / - / 15 6
86Lmo124658 45% 0.455 PF00271 C6_S160 - (0)13 4 / 19 / 18 6
87Lmo022534 47% 0.642 PF02152 C8_S127 - (13)11 - / - / 17 6
88Lmo137236 39% 0.532 PF00676 C5_S133 - (23)8 - / 13 / 8 6
89Lmo255627 67% 0.655 PF01116 C2_S122 - (17)9 - / - / 19 6
90Lmo275844 74% 0.535 PF00478 C2_S164 - (45)19 - / 13 / 24 6
91Lmo022831 70% 0.553 PF01336 C7_S140 - (28)13 1 / 7 / 5 6
92Lmo148843 49% 0.543 PF01467 C3_S188 - (55)18 15 / 7 / 9 6
93Lmo245554 81% 0.582 PF03952 C1_S136 - (29)11 - / 2 / 26 6
94Lmo010520 32% 0.434 PF00704 C1_S183 - (2)14 - / - / 12 6
95Lmo136028 50% 0.652 PF02882 C4_S149 - (40)15 6 / 11 / 14 6
96Lmo103951 41% 0.572 PF00005 C1_S141 - (37)16 - / - / 26 6
97Lmo145520 67% 0.569 PF01807 C1_S114 - (0)10 - / 5 / 6 6
98Lmo031923 69% 0.613 PF00232 C2_S193 - (70)12 - / - / 9 6
99Lmo108231 54% 0.577 PF00908 C4_S180 - (38)15 - / 3 / 21 6
100Lmo190440 37% 0.498 PF03099 C5_S160 - (15)13 11 / 12 / 8 6

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