Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
ENV_RBD (Jul 2013)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1Ko_RBD5 41% 0.514 -PF00429 4 - (0)0 - / - / - -
2Ampho_RBD5 60% 0.481 0.402 PF00429 3 - (0)0 - / - / - -
3KoRVB_RBD5 42% 0.546 -PF00429 3 - (0)0 - / - / - -
4Xeno_PRR5 57% 0.464 -PF00429 3 - (0)0 - / - / - -
5FeLVC_RBD5 73% 0.459 -PF00429 3 - (0)0 - / - / - -
6friend_RBD4 100% 0.851 -PF00429 3 - (0)1 - / - / - -
7PERVB_RBD3 37% 0.691 -PF00429 3 - (0)0 - / - / - -
8PERVA_PRR3 38% 0.462 -PF00429 3 - (0)0 - / - / - -
9HERVR_R2 20% 0.418 -PF00429 1 - (0)0 - / - / - -
10BLV_RBD0 42% 0.297 -PF07686 1 - (0)0 - / - / - -
11H2RBD_RBD0 35% 0.181 -PF00856 6 - (6)0 - / - / - -
12RDSU2220 28% 0.616 -PF09480 2 - (0)0 - / - / - -
13H1RBD_RBD0 44% 0.475 -PF00522 0 - (0)0 - / - / - -

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