Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
ENV_RBD (Jul 2013)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1friend_RBD4 100% 0.851 -PF00429 3 - (0)1 - / - / - -
2Xeno_PRR5 57% 0.464 -PF00429 3 - (0)0 - / - / - -
3RDSU2220 28% 0.616 -PF09480 2 - (0)0 - / - / - -
4PERVB_RBD3 37% 0.691 -PF00429 3 - (0)0 - / - / - -
5PERVA_PRR3 38% 0.462 -PF00429 3 - (0)0 - / - / - -
6Ko_RBD5 41% 0.514 -PF00429 4 - (0)0 - / - / - -
7KoRVB_RBD5 42% 0.546 -PF00429 3 - (0)0 - / - / - -
8HERVR_R2 20% 0.418 -PF00429 1 - (0)0 - / - / - -
9H2RBD_RBD0 35% 0.181 -PF00856 6 - (6)0 - / - / - -
10H1RBD_RBD0 44% 0.475 -PF00522 0 - (0)0 - / - / - -
11FeLVC_RBD5 73% 0.459 -PF00429 3 - (0)0 - / - / - -
12BLV_RBD0 42% 0.297 -PF07686 1 - (0)0 - / - / - -
13Ampho_RBD5 60% 0.481 0.402 PF00429 3 - (0)0 - / - / - -

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