Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
ENV_RBD (Jul 2013)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1Ampho_RBD5 60% 0.481 0.402 PF00429 3 - (0)0 - / - / - -
2friend_RBD4 100% 0.851 -PF00429 3 - (0)1 - / - / - -
3BLV_RBD0 42% 0.297 -PF07686 1 - (0)0 - / - / - -
4KoRVB_RBD5 42% 0.546 -PF00429 3 - (0)0 - / - / - -
5Xeno_PRR5 57% 0.464 -PF00429 3 - (0)0 - / - / - -
6PERVB_RBD3 37% 0.691 -PF00429 3 - (0)0 - / - / - -
7HERVR_R2 20% 0.418 -PF00429 1 - (0)0 - / - / - -
8H1RBD_RBD0 44% 0.475 -PF00522 0 - (0)0 - / - / - -
9FeLVC_RBD5 73% 0.459 -PF00429 3 - (0)0 - / - / - -
10H2RBD_RBD0 35% 0.181 -PF00856 6 - (6)0 - / - / - -
11PERVA_PRR3 38% 0.462 -PF00429 3 - (0)0 - / - / - -
12Ko_RBD5 41% 0.514 -PF00429 4 - (0)0 - / - / - -
13RDSU2220 28% 0.616 -PF09480 2 - (0)0 - / - / - -

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