Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
ENV_RBD (Jul 2013)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1Ampho_RBD5 60% 0.481 0.402 PF00429 3 - (0)0 - / - / - -
2HERVR_R2 20% 0.418 -PF00429 1 - (0)0 - / - / - -
3Ko_RBD5 41% 0.514 -PF00429 4 - (0)0 - / - / - -
4Xeno_PRR5 57% 0.464 -PF00429 3 - (0)0 - / - / - -
5H2RBD_RBD0 35% 0.181 -PF00856 6 - (6)0 - / - / - -
6FeLVC_RBD5 73% 0.459 -PF00429 3 - (0)0 - / - / - -
7H1RBD_RBD0 44% 0.475 -PF00522 0 - (0)0 - / - / - -
8BLV_RBD0 42% 0.297 -PF07686 1 - (0)0 - / - / - -
9RDSU2220 28% 0.616 -PF09480 2 - (0)0 - / - / - -
10friend_RBD4 100% 0.851 -PF00429 3 - (0)1 - / - / - -
11KoRVB_RBD5 42% 0.546 -PF00429 3 - (0)0 - / - / - -
12PERVA_PRR3 38% 0.462 -PF00429 3 - (0)0 - / - / - -
13PERVB_RBD3 37% 0.691 -PF00429 3 - (0)0 - / - / - -

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