Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site (All) Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1682_tI_BRADI8 73% 0.691 0.673 PF00234 C1_S14 - (0)- - / 2 / 2 -
2433_tI_ZEAMP8 86% 0.709 0.709 PF00234 C1_S14 - (0)- - / 2 / 2 -
3430_tI_ZEAMP8 86% 0.591 0.612 PF00234 C2_S14 - (0)- - / 2 / 2 -
4429_tI_ZEAMP10 87% 0.646 0.667 PF00234 C1_S14 - (0)- - / 2 / 2 -
5414_tI_ZEADI8 86% 0.670 0.672 PF00234 C2_S14 - (0)- - / 2 / 2 -
6410_tI_ZEADI8 88% 0.635 0.655 PF00234 C2_S14 - (0)- - / 2 / 2 -
7054_tI_WHEAT9 76% 0.558 0.558 PF00234 C2_S14 - (0)- - / 2 / 2 -
8052_tI_WHEAT9 77% 0.529 0.566 PF00234 C2_S14 - (0)- - / 2 / 2 -
9424_tI_MAIZE9 86% 0.643 0.643 PF00234 C3_S14 - (0)- - / 2 / 2 -
10434_tI_ZEAMP8 88% 0.625 0.657 PF00234 C2_S14 - (0)- - / 2 / 2 -
11437_tI_ZEAMP8 99% 0.687 0.687 PF00234 C2_S14 - (0)- - / 2 / 2 -
12067_tI_ORYSA9 76% 0.558 0.558 PF00234 C2_S14 - (0)- - / 2 / 2 -
13684_tI_BRADI8 70% 0.542 0.563 PF00234 C2_S14 - (0)- - / 2 / 2 -
14522_tI_ORYSA10 75% 0.533 0.544 PF00234 C2_S14 - (0)- - / 2 / 2 -
15421_tI_MAIZE8 88% 0.625 0.657 PF00234 C2_S14 - (0)- - / 2 / 2 -
16376_tI_SOLLC9 74% 0.647 0.662 PF00234 C4_S14 - (0)- - / 2 / 2 -
17069_tI_ORYSA9 64% 0.444 0.464 PF00234 C2_S14 - (0)- - / 2 / 2 -
18073_tI_ORYSA9 77% 0.529 0.566 PF00234 C2_S14 - (0)- - / 2 / 2 -
19380_tI_SOLPN8 77% 0.577 0.587 PF00234 C4_S14 - (0)- - / 2 / 2 -
20375_tI_SOLCI8 74% 0.625 0.618 PF00234 C3_S14 - (0)- - / 2 / 2 -
21432_tI_ZEAMP9 88% 0.645 0.657 PF00234 C1_S14 - (0)- - / 2 / 2 -
22425_tI_MAIZE10 87% 0.652 0.643 PF00234 C3_S14 - (0)- - / 2 / 2 -
23200_tI_ATRNU9 63% 0.578 0.578 PF00234 C2_S14 - (0)- - / 2 / 1 -
24152_tIV_ARATH15 80% 0.586 0.588 PF00234 C3_S12 - (0)- - / 2 / - -
25151_tIV_ARATH11 100% 0.553 0.572 PF00234 C3_S12 - (0)- - / 2 / - -
26234_tI_CITSI8 68% 0.477 0.527 PF00234 C3_S14 - (0)- - / 1 / 3 -
27438_tI_ZEAMP8 99% 0.632 0.656 PF00234 C2_S14 - (0)- - / 1 / 3 -
28364_tI_RUBID9 69% 0.628 0.628 PF00234 C4_S14 - (0)- - / 1 / 3 -
29409_tI_ZEADI8 100% 0.642 0.653 PF00234 C2_S14 - (0)- - / 1 / 3 -
30291_tI_NICGL8 59% 0.589 0.591 PF00234 C2_S14 - (0)- - / 1 / 3 -
31394_tI_VIGRA8 64% 0.542 0.588 PF00234 C2_S14 - (0)- - / 1 / 3 -
32412_tI_ZEADI8 98% 0.661 0.649 PF00234 C3_S14 - (0)- - / 1 / 3 -
33240_tI_FRAAN8 62% 0.574 0.576 PF00234 C2_S14 - (0)- - / 1 / 3 -
34275_tI_LENCU8 60% 0.518 0.521 PF00234 C3_S14 - (0)- - / 1 / 3 -
35431_tI_ZEAMP8 100% 0.642 0.653 PF00234 C3_S14 - (0)- - / 1 / 3 -
36265_tI_HORVU9 72% 0.468 0.527 PF00234 C2_S14 - (0)- - / 1 / 3 -
37295_tI_TOBAC8 60% 0.539 0.539 PF00234 C3_S14 - (0)- - / 1 / 3 -
38233_tI_CITSI10 67% 0.545 0.546 PF00234 C3_S14 - (0)- - / 1 / 3 -
39232_tI_CITJA8 68% 0.507 0.509 PF00234 C2_S14 - (0)- - / 1 / 3 -
40416_tI_MAIZE8 99% 0.632 0.656 PF00234 C2_S14 - (0)- - / 1 / 3 -
41774_tI_MEDTR9 65% 0.548 0.532 PF00234 C2_S14 - (0)- - / 1 / 3 -
42374_tI_SOLCH10 75% 0.575 0.575 PF00234 C5_S14 - (0)- - / 1 / 3 -
43365_tI_SALMI8 64% 0.521 0.505 PF00234 C3_S14 - (0)- - / 1 / 3 -
44276_tI_LENCU10 59% 0.655 0.619 PF00234 C2_S14 - (0)- - / 1 / 3 -
45077_tI_ARATH9 57% 0.530 0.588 PF00234 C2_S14 - (0)- - / 1 / 3 -
46428_tI_MAIZE8 100% 0.642 0.653 PF00234 C2_S14 - (0)- - / 1 / 3 -
47411_tI_ZEADI8 98% 0.657 0.657 PF00234 C3_S14 - (0)- - / 1 / 3 -
48068_tI_ORYSA10 80% 0.631 0.577 PF00234 C2_S14 - (0)- - / 1 / 3 -
49389_tI_SORBI9 87% 0.569 0.633 PF00234 C2_S14 - (0)- - / 1 / 3 -
50277_tI_LENCU8 61% 0.559 0.559 PF00234 C3_S14 - (0)- - / 1 / 3 -

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