Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site (All) Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1144_tIII_ORYSA20 37% 0.758 0.784 PF00234 0 - (0)- - / - / - -
2577_tIII_ARATH20 41% 0.740 0.732 PF00234 0 - (0)- - / - / - -
3140_tIII_WHEAT20 36% 0.771 0.768 PF00234 0 - (0)- - / - / - -
4567_tIII_VITVI20 41% 0.609 0.621 PF00234 0 - (0)- - / - / - -
5554_tIII_BRANA20 36% 0.533 0.533 PF00234 0 - (0)- - / - / - -
6573_tIII_POPTR20 42% 0.654 0.720 PF00234 0 - (0)- - / - / - -
7559_tIII_LILLO20 38% 0.605 0.612 PF00234 0 - (0)- - / - / - -
8557_tIII_LILLO20 35% 0.635 0.615 PF00234 0 - (0)- - / - / - -
9558_tIII_SOLLC20 34% 0.549 0.660 PF00234 0 - (0)- - / - / - -
10575_tIII_RICCO19 41% 0.718 0.622 PF00234 0 - (0)- - / - / - -
11560_tIII_LILLO19 38% 0.665 0.651 PF00234 0 - (0)- - / - / - -
12556_tIII_LILHE19 37% 0.685 0.642 PF00234 0 - (0)- - / - / - -
13711_t0_SELMO19 40% 0.589 0.615 PF00234 0 - (0)- - / - / - -
14572_tIII_POPTR19 42% 0.686 0.686 PF00234 0 - (0)- - / - / - -
15569_tIII_BRANA19 35% 0.574 0.575 PF00234 0 - (0)- - / - / - -
16564_tIII_SINAL19 34% 0.555 0.533 PF00234 0 - (0)- - / - / - -
17142_tIII_WHEAT19 34% 0.691 0.681 PF00234 0 - (0)- - / - / - -
18642_tIII_THECC19 43% 0.598 0.577 PF00234 0 - (0)- - / - / - -
19551_tIII_SILLA19 39% 0.589 0.611 PF00234 0 - (0)- - / - / - -
20566_tIII_BRAOX19 35% 0.574 0.510 PF00234 0 - (0)- - / - / - -
21565_tIII_SINAR19 35% 0.574 0.575 PF00234 0 - (0)- - / - / - -
22563_tIII_ERUSA19 38% 0.617 0.579 PF00234 0 - (0)- - / - / - -
23147_tIII_ARATH19 41% 0.666 0.767 PF00234 0 - (0)- - / - / - -
24562_tIII_BRATO19 36% 0.594 0.572 PF00234 0 - (0)- - / - / - -
25146_tIII_ARATH19 43% 0.757 0.759 PF00234 0 - (0)- - / - / - -
26555_tIII_ANTMA19 45% 0.611 0.648 PF00234 0 - (0)- - / - / - -
27574_tIII_RICCO19 40% 0.626 0.665 PF00234 0 - (0)- - / - / - -
28145_tIII_ARATH18 33% 0.764 0.792 PF00234 0 - (0)- - / - / - -
29570_tIII_LILLO18 36% 0.627 0.535 PF00234 0 - (0)- - / - / - -
30663_tIII_BRADI18 35% 0.665 0.716 PF00234 0 - (0)- - / - / - -
31553_tIII_MAIZE18 34% 0.626 0.642 PF00234 0 - (0)- - / - / - -
32571_tIII_MAIZE18 36% 0.603 0.601 PF00234 0 - (0)- - / - / - -
33568_tIII_BRAOL18 36% 0.448 0.509 PF00234 0 - (0)- - / - / - -
34141_tIII_WHEAT18 39% 0.682 0.682 PF00234 0 - (0)- - / - / - -
35680_tIII_BRADI18 35% 0.563 0.598 PF00234 0 - (0)- - / - / - -
36552_tV_PINRA18 36% 0.576 0.576 PF00234 0 - (0)- - / - / - -
37561_tIII_ORYSI17 39% 0.626 0.668 PF00234 0 - (0)- - / - / - -
38768_tIV_VITVI17 44% 0.501 0.578 PF00234 C3_S11 - (0)- - / - / 1 -
39470_tIV_POPTR16 50% 0.468 0.482 PF00234 C2_S12 - (0)- - / - / 2 -
40578_t0_PINRA16 36% 0.695 0.754 PF00234 0 - (0)- - / - / - -
41506_tIV_MAIZE16 44% 0.477 0.446 PF00234 0 - (0)- - / - / - -
42143_tIII_ORYSA16 37% 0.713 0.713 PF00234 0 - (0)- - / - / - -
43576_t0_PINRA16 35% 0.752 0.729 PF00234 0 - (0)- - / - / - -
44751_tIV_VITVI16 54% 0.579 0.601 PF00234 C3_S12 - (0)- - / 1 / 1 -
45708_t0_SELMO15 35% 0.399 0.444 PF00234 0 - (0)- - / - / - -
46658_tIX_PHYPA15 34% 0.578 0.693 PF00234 0 - (0)- - / - / - -
47484_tIV_POPTR15 41% 0.503 0.496 PF00234 0 - (0)- - / - / - -
48485_tXI_POPTR15 34% 0.493 0.423 PF00234 0 - (0)- - / - / - -
49496_tIV_RICCO15 48% 0.562 0.502 PF00234 C1_S11 - (0)- - / - / 1 -
50152_tIV_ARATH15 80% 0.586 0.588 PF00234 C3_S12 - (0)- - / 2 / - -

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