Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site (All) Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1554_tIII_BRANA20 36% 0.533 0.533 PF00234 0 - (0)- - / - / - -
2558_tIII_SOLLC20 34% 0.549 0.660 PF00234 0 - (0)- - / - / - -
3567_tIII_VITVI20 41% 0.609 0.621 PF00234 0 - (0)- - / - / - -
4140_tIII_WHEAT20 36% 0.771 0.768 PF00234 0 - (0)- - / - / - -
5559_tIII_LILLO20 38% 0.605 0.612 PF00234 0 - (0)- - / - / - -
6557_tIII_LILLO20 35% 0.635 0.615 PF00234 0 - (0)- - / - / - -
7573_tIII_POPTR20 42% 0.654 0.720 PF00234 0 - (0)- - / - / - -
8577_tIII_ARATH20 41% 0.740 0.732 PF00234 0 - (0)- - / - / - -
9144_tIII_ORYSA20 37% 0.758 0.784 PF00234 0 - (0)- - / - / - -
10562_tIII_BRATO19 36% 0.594 0.572 PF00234 0 - (0)- - / - / - -
11555_tIII_ANTMA19 45% 0.611 0.648 PF00234 0 - (0)- - / - / - -
12560_tIII_LILLO19 38% 0.665 0.651 PF00234 0 - (0)- - / - / - -
13575_tIII_RICCO19 41% 0.718 0.622 PF00234 0 - (0)- - / - / - -
14147_tIII_ARATH19 41% 0.666 0.767 PF00234 0 - (0)- - / - / - -
15711_t0_SELMO19 40% 0.589 0.615 PF00234 0 - (0)- - / - / - -
16566_tIII_BRAOX19 35% 0.574 0.510 PF00234 0 - (0)- - / - / - -
17564_tIII_SINAL19 34% 0.555 0.533 PF00234 0 - (0)- - / - / - -
18146_tIII_ARATH19 43% 0.757 0.759 PF00234 0 - (0)- - / - / - -
19572_tIII_POPTR19 42% 0.686 0.686 PF00234 0 - (0)- - / - / - -
20556_tIII_LILHE19 37% 0.685 0.642 PF00234 0 - (0)- - / - / - -
21574_tIII_RICCO19 40% 0.626 0.665 PF00234 0 - (0)- - / - / - -
22563_tIII_ERUSA19 38% 0.617 0.579 PF00234 0 - (0)- - / - / - -
23565_tIII_SINAR19 35% 0.574 0.575 PF00234 0 - (0)- - / - / - -
24551_tIII_SILLA19 39% 0.589 0.611 PF00234 0 - (0)- - / - / - -
25569_tIII_BRANA19 35% 0.574 0.575 PF00234 0 - (0)- - / - / - -
26142_tIII_WHEAT19 34% 0.691 0.681 PF00234 0 - (0)- - / - / - -
27642_tIII_THECC19 43% 0.598 0.577 PF00234 0 - (0)- - / - / - -
28552_tV_PINRA18 36% 0.576 0.576 PF00234 0 - (0)- - / - / - -
29145_tIII_ARATH18 33% 0.764 0.792 PF00234 0 - (0)- - / - / - -
30568_tIII_BRAOL18 36% 0.448 0.509 PF00234 0 - (0)- - / - / - -
31141_tIII_WHEAT18 39% 0.682 0.682 PF00234 0 - (0)- - / - / - -
32553_tIII_MAIZE18 34% 0.626 0.642 PF00234 0 - (0)- - / - / - -
33663_tIII_BRADI18 35% 0.665 0.716 PF00234 0 - (0)- - / - / - -
34680_tIII_BRADI18 35% 0.563 0.598 PF00234 0 - (0)- - / - / - -
35570_tIII_LILLO18 36% 0.627 0.535 PF00234 0 - (0)- - / - / - -
36571_tIII_MAIZE18 36% 0.603 0.601 PF00234 0 - (0)- - / - / - -
37561_tIII_ORYSI17 39% 0.626 0.668 PF00234 0 - (0)- - / - / - -
38768_tIV_VITVI17 44% 0.501 0.578 PF00234 C3_S11 - (0)- - / - / 1 -
39578_t0_PINRA16 36% 0.695 0.754 PF00234 0 - (0)- - / - / - -
40751_tIV_VITVI16 54% 0.579 0.601 PF00234 C3_S12 - (0)- - / 1 / 1 -
41143_tIII_ORYSA16 37% 0.713 0.713 PF00234 0 - (0)- - / - / - -
42470_tIV_POPTR16 50% 0.468 0.482 PF00234 C2_S12 - (0)- - / - / 2 -
43506_tIV_MAIZE16 44% 0.477 0.446 PF00234 0 - (0)- - / - / - -
44576_t0_PINRA16 35% 0.752 0.729 PF00234 0 - (0)- - / - / - -
45496_tIV_RICCO15 48% 0.562 0.502 PF00234 C1_S11 - (0)- - / - / 1 -
46484_tIV_POPTR15 41% 0.503 0.496 PF00234 0 - (0)- - / - / - -
47152_tIV_ARATH15 80% 0.586 0.588 PF00234 C3_S12 - (0)- - / 2 / - -
48658_tIX_PHYPA15 34% 0.578 0.693 PF00234 0 - (0)- - / - / - -
49468_tIV_PICSI15 43% 0.445 0.515 PF00234 C4_S11 - (0)- - / 1 / - -
50660_tIX_PHYPA15 27% 0.559 0.542 PF00234 0 - (0)- - / - / - -

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