Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site (All) Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
50484_tIV_POPTR15 41% 0.503 0.496 PF00234 0 - (0)- - / - / - -
51496_tIV_RICCO15 48% 0.562 0.502 PF00234 C1_S11 - (0)- - / - / 1 -
52485_tXI_POPTR15 34% 0.493 0.423 PF00234 0 - (0)- - / - / - -
53733_tXI_SELMO14 36% 0.515 0.519 PF00234 0 - (0)- - / - / - -
54661_tIX_PHYPA14 34% 0.553 0.690 PF00234 0 - (0)- - / - / - -
55499_tIV_JATCU14 45% 0.535 0.542 PF00234 0 - (0)- - / - / - -
56497_tIV_RICCO14 48% 0.559 0.515 PF00234 C3_S11 - (0)- - / - / 1 -
57465_tIV_VITVI14 49% 0.667 0.669 PF00234 C3_S11 - (0)- - / - / 1 -
58175_tVI_WHEAT13 33% 0.585 0.594 PF00234 0 - (0)- - / - / - -
59717_tXI_SELMO13 32% 0.391 0.390 PF00234 0 - (0)- - / - / - -
60602_tIV_THECC13 53% 0.490 0.435 PF00234 C3_S12 - (0)- - / 1 / 1 -
61480_tXI_POPTR13 34% 0.542 0.545 PF00234 0 - (0)- - / - / - -
62799_tIV_ARATH13 37% 0.403 0.476 PF00234 0 - (0)- - / - / - -
63725_t0_SELMO13 33% 0.392 0.468 PF00234 0 - (0)- - / - / - -
64136_tII_ARATH13 45% 0.537 0.535 PF00234 0 - (0)- - / - / - -
65449_tII_MAIZE13 53% 0.645 0.603 PF14368 0 - (0)- - / - / - -
66491_tIV_RICCO13 41% 0.503 0.517 PF00234 0 - (0)- - / - / - -
67621_tIV_THECC13 47% 0.565 0.614 PF00234 C3_S12 - (0)- - / - / 2 -
68719_tV_SELMO13 33% 0.427 0.426 PF00234 0 - (0)- - / - / - -
69454_tII_MAIZE13 42% 0.784 0.762 PF14368 0 - (0)- - / - / - -
70106_tII_WHEAT13 53% 0.645 0.603 PF14368 0 - (0)- - / - / - -
71486_tIV_POPTR13 50% 0.471 0.459 PF00234 C1_S12 - (0)- - / - / 2 -
72649_tIX_PHYPA13 27% 0.586 0.589 PF00234 0 - (0)- - / - / - -
73718_tXI_SELMO13 32% 0.391 0.390 PF00234 0 - (0)- - / - / - -
74467_tIV_VITVI13 55% 0.540 0.541 PF00234 C4_S12 - (0)- - / - / 2 -
75153_tIV_ARATH13 34% 0.500 0.478 PF00234 0 - (0)- - / - / - -
76154_tIV_ARATH13 36% 0.704 0.703 PF00234 0 - (0)- - / - / - -
77653_t0_PHYPA13 34% 0.490 0.499 PF00234 0 - (0)- - / - / - -
78648_tIX_PHYPA13 36% 0.567 0.582 PF00234 0 - (0)- - / - / - -
79448_tII_VIGUN12 44% 0.557 0.560 PF00234 0 - (0)- - / - / - -
80538_tII_POPTR12 46% 0.641 0.640 PF00234 0 - (0)- - / - / - -
81607_tII_THECC12 40% 0.809 0.809 PF00234 0 - (0)- - / - / - -
82101_tII_WHEAT12 53% 0.510 0.461 PF00234 C5_S11 - (0)- - / - / 1 -
83117_tII_ORYSA12 49% 0.544 0.529 PF14368 C3_S11 - (0)- - / - / 1 -
84769_tII_VITVI12 39% 0.692 0.708 PF00234 0 - (0)- - / - / - -
85102_tII_WHEAT12 54% 0.611 0.611 PF00234 0 - (0)- - / - / - -
86535_tII_MAIZE12 63% 0.659 0.704 PF00234 C2_S11 - (0)- - / 1 / - -
87613_tVIII_THECC12 29% 0.596 0.689 PF00234 0 - (0)- - / - / - -
88644_tV_THECC12 32% 0.626 0.627 PF00234 0 - (0)- - / - / - -
89126_tII_ORYSA12 46% 0.618 0.646 PF00234 C6_S11 - (0)- - / - / 1 -
90451_tII_MAIZE12 68% 0.688 0.689 PF00234 C1_S11 - (0)- - / 1 / - -
91760_tXI_VITVI12 35% 0.419 0.415 PF00234 0 - (0)- - / - / - -
92094_tII_WHEAT12 73% 0.569 0.567 PF14368 C3_S11 - (0)- - / 1 / - -
93149_tIV_ORYSA12 51% 0.390 0.424 PF00234 C3_S11 - (0)- - / 1 / - -
94135_tII_ARATH12 43% 0.551 0.620 PF00234 0 - (0)- - / - / - -
95450_tII_MAIZE12 53% 0.495 0.477 PF14368 0 - (0)- - / - / - -
96087_tII_WHEAT12 97% 0.643 0.663 PF00234 C2_S11 - (0)- - / 1 / - -
97537_tII_MEDTR12 40% 0.724 0.724 PF00234 0 - (0)- - / - / - -
98446_tII_SOLTU12 43% 0.600 0.603 PF00234 0 - (0)- - / - / - -
99096_tII_WHEAT12 75% 0.593 0.619 PF00234 C3_S11 - (0)- - / - / 1 -
100636_tII_THECC12 47% 0.712 0.699 PF00234 0 - (0)- - / - / - -

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