Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site (All) Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
50485_tXI_POPTR15 34% 0.493 0.423 PF00234 0 - (0)- - / - / - -
51496_tIV_RICCO15 48% 0.562 0.502 PF00234 C1_S11 - (0)- - / - / 1 -
52708_t0_SELMO15 35% 0.399 0.444 PF00234 0 - (0)- - / - / - -
53661_tIX_PHYPA14 34% 0.553 0.690 PF00234 0 - (0)- - / - / - -
54465_tIV_VITVI14 49% 0.667 0.669 PF00234 C3_S11 - (0)- - / - / 1 -
55733_tXI_SELMO14 36% 0.515 0.519 PF00234 0 - (0)- - / - / - -
56499_tIV_JATCU14 45% 0.535 0.542 PF00234 0 - (0)- - / - / - -
57497_tIV_RICCO14 48% 0.559 0.515 PF00234 C3_S11 - (0)- - / - / 1 -
58467_tIV_VITVI13 55% 0.540 0.541 PF00234 C4_S12 - (0)- - / - / 2 -
59799_tIV_ARATH13 37% 0.403 0.476 PF00234 0 - (0)- - / - / - -
60454_tII_MAIZE13 42% 0.784 0.762 PF14368 0 - (0)- - / - / - -
61621_tIV_THECC13 47% 0.565 0.614 PF00234 C3_S12 - (0)- - / - / 2 -
62154_tIV_ARATH13 36% 0.704 0.703 PF00234 0 - (0)- - / - / - -
63449_tII_MAIZE13 53% 0.645 0.603 PF14368 0 - (0)- - / - / - -
64725_t0_SELMO13 33% 0.392 0.468 PF00234 0 - (0)- - / - / - -
65106_tII_WHEAT13 53% 0.645 0.603 PF14368 0 - (0)- - / - / - -
66486_tIV_POPTR13 50% 0.471 0.459 PF00234 C1_S12 - (0)- - / - / 2 -
67649_tIX_PHYPA13 27% 0.586 0.589 PF00234 0 - (0)- - / - / - -
68717_tXI_SELMO13 32% 0.391 0.390 PF00234 0 - (0)- - / - / - -
69718_tXI_SELMO13 32% 0.391 0.390 PF00234 0 - (0)- - / - / - -
70480_tXI_POPTR13 34% 0.542 0.545 PF00234 0 - (0)- - / - / - -
71136_tII_ARATH13 45% 0.537 0.535 PF00234 0 - (0)- - / - / - -
72491_tIV_RICCO13 41% 0.503 0.517 PF00234 0 - (0)- - / - / - -
73648_tIX_PHYPA13 36% 0.567 0.582 PF00234 0 - (0)- - / - / - -
74153_tIV_ARATH13 34% 0.500 0.478 PF00234 0 - (0)- - / - / - -
75175_tVI_WHEAT13 33% 0.585 0.594 PF00234 0 - (0)- - / - / - -
76602_tIV_THECC13 53% 0.490 0.435 PF00234 C3_S12 - (0)- - / 1 / 1 -
77653_t0_PHYPA13 34% 0.490 0.499 PF00234 0 - (0)- - / - / - -
78719_tV_SELMO13 33% 0.427 0.426 PF00234 0 - (0)- - / - / - -
79121_tII_ORYSA12 57% 0.457 0.730 PF00234 C4_S11 - (0)- - / - / 1 -
80740_tII_VITVI12 39% 0.743 0.744 PF00234 0 - (0)- - / - / - -
81583_tV_CICAR12 34% 0.424 0.388 PF00234 0 - (0)- - / - / - -
82536_tII_MAIZE12 37% 0.576 0.640 PF00234 0 - (0)- - / - / - -
83544_tII_TAMHI12 51% 0.571 0.568 PF00234 0 - (0)- - / - / - -
84636_tII_THECC12 47% 0.712 0.699 PF00234 0 - (0)- - / - / - -
85686_tII_BRADI12 60% 0.532 0.626 PF00234 C2_S11 - (0)- - / 1 / - -
86644_tV_THECC12 32% 0.626 0.627 PF00234 0 - (0)- - / - / - -
87448_tII_VIGUN12 44% 0.557 0.560 PF00234 0 - (0)- - / - / - -
88119_tII_ORYSA12 51% 0.664 0.665 PF14368 0 - (0)- - / - / - -
89626_tIV_THECC12 50% 0.539 0.660 PF00234 0 - (0)- - / - / - -
90532_tII_MAIZE12 38% 0.591 0.611 PF00234 0 - (0)- - / - / - -
91531_tII_PICSI12 42% 0.753 0.711 PF14368 0 - (0)- - / - / - -
92464_tVI_VITVI12 28% 0.403 0.364 PF00234 0 - (0)- - / - / - -
93085_tII_WHEAT12 100% 0.573 0.608 PF00234 C4_S11 - (0)- - / - / 1 -
94607_tII_THECC12 40% 0.809 0.809 PF00234 0 - (0)- - / - / - -
95123_tII_ORYSA12 54% 0.406 0.496 PF00234 C5_S11 - (0)- - / - / 1 -
96441_tII_PRUAR12 46% 0.602 0.594 PF00234 0 - (0)- - / - / - -
97090_tII_WHEAT12 78% 0.572 0.614 PF00234 C3_S11 - (0)- - / 1 / - -
98744_tII_VITVI12 40% 0.658 0.675 PF00234 0 - (0)- - / - / - -
99529_tII_ORYSI12 97% 0.599 0.581 PF00234 C3_S11 - (0)- - / 1 / - -
100108_tII_WHEAT12 67% 0.552 0.631 PF14368 C6_S11 - (0)- - / 1 / - -

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