Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site (All) Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
50152_tIV_ARATH15 80% 0.586 0.588 PF00234 C3_S12 - (0)- - / 2 / - -
51485_tXI_POPTR15 34% 0.493 0.423 PF00234 0 - (0)- - / - / - -
52484_tIV_POPTR15 41% 0.503 0.496 PF00234 0 - (0)- - / - / - -
53733_tXI_SELMO14 36% 0.515 0.519 PF00234 0 - (0)- - / - / - -
54497_tIV_RICCO14 48% 0.559 0.515 PF00234 C3_S11 - (0)- - / - / 1 -
55465_tIV_VITVI14 49% 0.667 0.669 PF00234 C3_S11 - (0)- - / - / 1 -
56499_tIV_JATCU14 45% 0.535 0.542 PF00234 0 - (0)- - / - / - -
57661_tIX_PHYPA14 34% 0.553 0.690 PF00234 0 - (0)- - / - / - -
58480_tXI_POPTR13 34% 0.542 0.545 PF00234 0 - (0)- - / - / - -
59136_tII_ARATH13 45% 0.537 0.535 PF00234 0 - (0)- - / - / - -
60648_tIX_PHYPA13 36% 0.567 0.582 PF00234 0 - (0)- - / - / - -
61649_tIX_PHYPA13 27% 0.586 0.589 PF00234 0 - (0)- - / - / - -
62449_tII_MAIZE13 53% 0.645 0.603 PF14368 0 - (0)- - / - / - -
63718_tXI_SELMO13 32% 0.391 0.390 PF00234 0 - (0)- - / - / - -
64467_tIV_VITVI13 55% 0.540 0.541 PF00234 C4_S12 - (0)- - / - / 2 -
65153_tIV_ARATH13 34% 0.500 0.478 PF00234 0 - (0)- - / - / - -
66717_tXI_SELMO13 32% 0.391 0.390 PF00234 0 - (0)- - / - / - -
67486_tIV_POPTR13 50% 0.471 0.459 PF00234 C1_S12 - (0)- - / - / 2 -
68175_tVI_WHEAT13 33% 0.585 0.594 PF00234 0 - (0)- - / - / - -
69621_tIV_THECC13 47% 0.565 0.614 PF00234 C3_S12 - (0)- - / - / 2 -
70725_t0_SELMO13 33% 0.392 0.468 PF00234 0 - (0)- - / - / - -
71154_tIV_ARATH13 36% 0.704 0.703 PF00234 0 - (0)- - / - / - -
72719_tV_SELMO13 33% 0.427 0.426 PF00234 0 - (0)- - / - / - -
73491_tIV_RICCO13 41% 0.503 0.517 PF00234 0 - (0)- - / - / - -
74106_tII_WHEAT13 53% 0.645 0.603 PF14368 0 - (0)- - / - / - -
75799_tIV_ARATH13 37% 0.403 0.476 PF00234 0 - (0)- - / - / - -
76602_tIV_THECC13 53% 0.490 0.435 PF00234 C3_S12 - (0)- - / 1 / 1 -
77653_t0_PHYPA13 34% 0.490 0.499 PF00234 0 - (0)- - / - / - -
78454_tII_MAIZE13 42% 0.784 0.762 PF14368 0 - (0)- - / - / - -
79100_tII_WHEAT12 53% 0.541 0.541 PF00234 C4_S11 - (0)- - / - / 1 -
80534_tII_MAIZE12 53% 0.559 0.560 PF00234 0 - (0)- - / - / - -
81099_tII_WHEAT12 51% 0.667 0.711 PF00234 0 - (0)- - / - / - -
82112_tII_WHEAT12 51% 0.632 0.655 PF00234 C1_S11 - (0)- - / - / 1 -
83120_tII_ORYSA12 57% 0.499 0.660 PF00234 C4_S11 - (0)- - / - / 1 -
84542_tII_TAMHI12 41% 0.616 0.648 PF14368 0 - (0)- - / - / - -
85447_tII_TAMAN12 46% 0.674 0.675 PF00234 0 - (0)- - / - / - -
86668_tII_BRADI12 49% 0.643 0.640 PF00234 0 - (0)- - / - / - -
87644_tV_THECC12 32% 0.626 0.627 PF00234 0 - (0)- - / - / - -
88441_tII_PRUAR12 46% 0.602 0.594 PF00234 0 - (0)- - / - / - -
89744_tII_VITVI12 40% 0.658 0.675 PF00234 0 - (0)- - / - / - -
90789_tII_ARATH12 38% 0.655 0.653 PF00234 0 - (0)- - / - / - -
91472_t0_PHYPA12 34% 0.471 0.486 PF00234 0 - (0)- - / - / - -
92128_tII_ARATH12 38% 0.612 0.615 PF00234 0 - (0)- - / - / - -
93126_tII_ORYSA12 46% 0.618 0.646 PF00234 C6_S11 - (0)- - / - / 1 -
94118_tII_ORYSA12 51% 0.647 0.649 PF00234 0 - (0)- - / - / - -
95548_tII_HYAOR12 42% 0.649 0.687 PF00234 0 - (0)- - / - / - -
96654_t0_PHYPA12 36% 0.371 0.472 PF00234 0 - (0)- - / - / - -
97538_tII_POPTR12 46% 0.641 0.640 PF00234 0 - (0)- - / - / - -
98547_tII_HORVU12 54% 0.481 0.483 PF00234 C3_S11 - (0)- - / - / 1 -
99455_tII_MAIZE12 50% 0.660 0.660 PF00234 0 - (0)- - / - / - -
100540_tII_POPTR12 41% 0.707 0.758 PF00234 0 - (0)- - / - / - -

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