Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site (All) Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
50658_tIX_PHYPA15 34% 0.578 0.693 PF00234 0 - (0)- - / - / - -
51468_tIV_PICSI15 43% 0.445 0.515 PF00234 C4_S11 - (0)- - / 1 / - -
52485_tXI_POPTR15 34% 0.493 0.423 PF00234 0 - (0)- - / - / - -
53499_tIV_JATCU14 45% 0.535 0.542 PF00234 0 - (0)- - / - / - -
54661_tIX_PHYPA14 34% 0.553 0.690 PF00234 0 - (0)- - / - / - -
55465_tIV_VITVI14 49% 0.667 0.669 PF00234 C3_S11 - (0)- - / - / 1 -
56497_tIV_RICCO14 48% 0.559 0.515 PF00234 C3_S11 - (0)- - / - / 1 -
57733_tXI_SELMO14 36% 0.515 0.519 PF00234 0 - (0)- - / - / - -
58717_tXI_SELMO13 32% 0.391 0.390 PF00234 0 - (0)- - / - / - -
59480_tXI_POPTR13 34% 0.542 0.545 PF00234 0 - (0)- - / - / - -
60602_tIV_THECC13 53% 0.490 0.435 PF00234 C3_S12 - (0)- - / 1 / 1 -
61154_tIV_ARATH13 36% 0.704 0.703 PF00234 0 - (0)- - / - / - -
62454_tII_MAIZE13 42% 0.784 0.762 PF14368 0 - (0)- - / - / - -
63486_tIV_POPTR13 50% 0.471 0.459 PF00234 C1_S12 - (0)- - / - / 2 -
64467_tIV_VITVI13 55% 0.540 0.541 PF00234 C4_S12 - (0)- - / - / 2 -
65449_tII_MAIZE13 53% 0.645 0.603 PF14368 0 - (0)- - / - / - -
66153_tIV_ARATH13 34% 0.500 0.478 PF00234 0 - (0)- - / - / - -
67718_tXI_SELMO13 32% 0.391 0.390 PF00234 0 - (0)- - / - / - -
68106_tII_WHEAT13 53% 0.645 0.603 PF14368 0 - (0)- - / - / - -
69725_t0_SELMO13 33% 0.392 0.468 PF00234 0 - (0)- - / - / - -
70653_t0_PHYPA13 34% 0.490 0.499 PF00234 0 - (0)- - / - / - -
71649_tIX_PHYPA13 27% 0.586 0.589 PF00234 0 - (0)- - / - / - -
72175_tVI_WHEAT13 33% 0.585 0.594 PF00234 0 - (0)- - / - / - -
73648_tIX_PHYPA13 36% 0.567 0.582 PF00234 0 - (0)- - / - / - -
74491_tIV_RICCO13 41% 0.503 0.517 PF00234 0 - (0)- - / - / - -
75136_tII_ARATH13 45% 0.537 0.535 PF00234 0 - (0)- - / - / - -
76799_tIV_ARATH13 37% 0.403 0.476 PF00234 0 - (0)- - / - / - -
77621_tIV_THECC13 47% 0.565 0.614 PF00234 C3_S12 - (0)- - / - / 2 -
78719_tV_SELMO13 33% 0.427 0.426 PF00234 0 - (0)- - / - / - -
79135_tII_ARATH12 43% 0.551 0.620 PF00234 0 - (0)- - / - / - -
80692_tII_PICSI12 42% 0.565 0.517 PF00234 0 - (0)- - / - / - -
81451_tII_MAIZE12 68% 0.688 0.689 PF00234 C1_S11 - (0)- - / 1 / - -
82530_tII_ORYSI12 51% 0.543 0.565 PF00234 C4_S11 - (0)- - / - / 1 -
83672_tII_BRADI12 56% 0.517 0.514 PF00234 0 - (0)- - / - / - -
84109_tII_WHEAT12 57% 0.396 0.487 PF00234 C1_S11 - (0)- - / - / 1 -
85099_tII_WHEAT12 51% 0.667 0.711 PF00234 0 - (0)- - / - / - -
86740_tII_VITVI12 39% 0.743 0.744 PF00234 0 - (0)- - / - / - -
87583_tV_CICAR12 34% 0.424 0.388 PF00234 0 - (0)- - / - / - -
88644_tV_THECC12 32% 0.626 0.627 PF00234 0 - (0)- - / - / - -
89760_tXI_VITVI12 35% 0.419 0.415 PF00234 0 - (0)- - / - / - -
90767_tII_VITVI12 44% 0.753 0.790 PF00234 0 - (0)- - / - / - -
91116_tII_ORYSA12 100% 0.447 0.536 PF00234 C4_S11 - (0)- - / 1 / - -
92448_tII_VIGUN12 44% 0.557 0.560 PF00234 0 - (0)- - / - / - -
93539_tII_POPTR12 43% 0.671 0.692 PF00234 0 - (0)- - / - / - -
94542_tII_TAMHI12 41% 0.616 0.648 PF14368 0 - (0)- - / - / - -
95686_tII_BRADI12 60% 0.532 0.626 PF00234 C2_S11 - (0)- - / 1 / - -
96137_tII_ARATH12 52% 0.415 0.404 PF00234 C4_S11 - (0)- - / - / 1 -
97541_tII_POPTR12 40% 0.771 0.772 PF00234 0 - (0)- - / - / - -
98728_tI_SELMO12 47% 0.657 0.639 PF00234 0 - (0)- - / - / - -
99119_tII_ORYSA12 51% 0.664 0.665 PF14368 0 - (0)- - / - / - -
100531_tII_PICSI12 42% 0.753 0.711 PF14368 0 - (0)- - / - / - -

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