Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site (All) Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
100135_tII_ARATH12 43% 0.551 0.620 PF00234 0 - (0)- - / - / - -
101761_tII_VITVI12 43% 0.852 0.853 PF00234 0 - (0)- - / - / - -
102174_tVI_WHEAT12 32% 0.626 0.669 PF00234 0 - (0)- - / - / - -
103115_tII_ORYSA12 37% 0.512 0.503 PF00234 0 - (0)- - / - / - -
104109_tII_WHEAT12 57% 0.396 0.487 PF00234 C1_S11 - (0)- - / - / 1 -
105795_tII_ARATH12 45% 0.504 0.585 PF00234 0 - (0)- - / - / - -
106760_tXI_VITVI12 35% 0.419 0.415 PF00234 0 - (0)- - / - / - -
107126_tII_ORYSA12 46% 0.618 0.646 PF00234 C6_S11 - (0)- - / - / 1 -
108545_tII_BRACM12 48% 0.663 0.664 PF00234 0 - (0)- - / - / - -
109628_tXI_THECC12 36% 0.526 0.528 PF00234 0 - (0)- - / - / - -
110538_tII_POPTR12 46% 0.641 0.640 PF00234 0 - (0)- - / - / - -
111442_tII_RICCO12 41% 0.751 0.728 PF00234 0 - (0)- - / - / - -
112679_tII_BRADI12 57% 0.523 0.484 PF00234 C4_S11 - (0)- - / - / 1 -
113123_tII_ORYSA12 54% 0.406 0.496 PF00234 C5_S11 - (0)- - / - / 1 -
114505_tIV_MAIZE12 51% 0.506 0.529 PF00234 C2_S11 - (0)- - / - / 1 -
115085_tII_WHEAT12 100% 0.573 0.608 PF00234 C4_S11 - (0)- - / - / 1 -
116583_tV_CICAR12 34% 0.424 0.388 PF00234 0 - (0)- - / - / - -
117550_tII_BRANA12 36% 0.432 0.451 PF00234 0 - (0)- - / - / - -
118614_tXI_THECC12 31% 0.473 0.476 PF00234 0 - (0)- - / - / - -
119441_tII_PRUAR12 46% 0.602 0.594 PF00234 0 - (0)- - / - / - -
120544_tII_TAMHI12 51% 0.571 0.568 PF00234 0 - (0)- - / - / - -
121616_tII_THECC12 41% 0.703 0.703 PF00234 0 - (0)- - / - / - -
122673_tII_BRADI12 53% 0.609 0.587 PF00234 0 - (0)- - / - / - -
123150_tIV_ORYSA12 45% 0.596 0.596 PF00234 0 - (0)- - / - / - -
124440_tII_HYAOR12 44% 0.672 0.673 PF00234 1 - (0)- - / - / - -
125099_tII_WHEAT12 51% 0.667 0.711 PF00234 0 - (0)- - / - / - -
126671_tII_BRADI12 49% 0.498 0.552 PF00234 0 - (0)- - / - / - -
127767_tII_VITVI12 44% 0.753 0.790 PF00234 0 - (0)- - / - / - -
128789_tII_ARATH12 38% 0.655 0.653 PF00234 0 - (0)- - / - / - -
129096_tII_WHEAT12 75% 0.593 0.619 PF00234 C3_S11 - (0)- - / - / 1 -
130091_tII_WHEAT12 99% 0.634 0.644 PF00234 C4_S11 - (0)- - / 1 / - -
131668_tII_BRADI12 49% 0.643 0.640 PF00234 0 - (0)- - / - / - -
132095_tII_WHEAT12 75% 0.585 0.636 PF00234 C2_S11 - (0)- - / 1 / - -
133120_tII_ORYSA12 57% 0.499 0.660 PF00234 C4_S11 - (0)- - / - / 1 -
134740_tII_VITVI12 39% 0.743 0.744 PF00234 0 - (0)- - / - / - -
135125_tII_ORYSA12 64% 0.546 0.547 PF00234 C3_S11 - (0)- - / 1 / - -
136644_tV_THECC12 32% 0.626 0.627 PF00234 0 - (0)- - / - / - -
137727_tV_SELMO12 36% 0.509 0.510 PF00234 0 - (0)- - / - / - -
138542_tII_TAMHI12 41% 0.616 0.648 PF14368 0 - (0)- - / - / - -
139122_tII_ORYSA12 55% 0.476 0.664 PF00234 C4_S11 - (0)- - / - / 1 -
140546_tII_HORVU12 73% 0.577 0.578 PF00234 C4_S11 - (0)- - / 1 / - -
141134_tII_ARATH12 39% 0.730 0.711 PF00234 0 - (0)- - / - / - -
142138_tII_ARATH12 33% 0.582 0.582 PF00234 0 - (0)- - / - / - -
143744_tII_VITVI12 40% 0.658 0.675 PF00234 0 - (0)- - / - / - -
144137_tII_ARATH12 52% 0.415 0.404 PF00234 C4_S11 - (0)- - / - / 1 -
145672_tII_BRADI12 56% 0.517 0.514 PF00234 0 - (0)- - / - / - -
146086_tII_WHEAT12 97% 0.625 0.691 PF00234 C5_S11 - (0)- - / 1 / - -
147728_tI_SELMO12 47% 0.657 0.639 PF00234 0 - (0)- - / - / - -
148090_tII_WHEAT12 78% 0.572 0.614 PF00234 C3_S11 - (0)- - / 1 / - -
149458_tII_ZINEL12 45% 0.623 0.718 PF00234 0 - (0)- - / - / - -
150469_tVI_PICSI12 34% 0.603 0.607 PF00234 0 - (0)- - / - / - -

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