Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site (All) Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1770_tII_VITVI12 43% 0.857 0.837 PF00234 0 - (0)- - / - / - -
2761_tII_VITVI12 43% 0.852 0.853 PF00234 0 - (0)- - / - / - -
3607_tII_THECC12 40% 0.809 0.809 PF00234 0 - (0)- - / - / - -
4454_tII_MAIZE13 42% 0.784 0.762 PF14368 0 - (0)- - / - / - -
5081_tI_ARATH8 47% 0.775 0.715 PF00234 1 - (0)- - / - / - -
6513_tI_POPTR7 48% 0.771 0.769 PF00234 1 - (0)- - / - / - -
7541_tII_POPTR12 40% 0.771 0.772 PF00234 0 - (0)- - / - / - -
8140_tIII_WHEAT20 36% 0.771 0.768 PF00234 0 - (0)- - / - / - -
9145_tIII_ARATH18 33% 0.764 0.792 PF00234 0 - (0)- - / - / - -
10144_tIII_ORYSA20 37% 0.758 0.784 PF00234 0 - (0)- - / - / - -
11611_tI_THECC8 46% 0.758 0.759 PF00234 0 - (0)- - / - / - -
12146_tIII_ARATH19 43% 0.757 0.759 PF00234 0 - (0)- - / - / - -
13767_tII_VITVI12 44% 0.753 0.790 PF00234 0 - (0)- - / - / - -
14531_tII_PICSI12 42% 0.753 0.711 PF14368 0 - (0)- - / - / - -
15576_t0_PINRA16 35% 0.752 0.729 PF00234 0 - (0)- - / - / - -
16442_tII_RICCO12 41% 0.751 0.728 PF00234 0 - (0)- - / - / - -
17740_tII_VITVI12 39% 0.743 0.744 PF00234 0 - (0)- - / - / - -
18577_tIII_ARATH20 41% 0.740 0.732 PF00234 0 - (0)- - / - / - -
19697_tI_POPTR7 46% 0.736 0.731 PF00234 1 - (0)- - / - / - -
20620_tI_THECC8 48% 0.736 0.722 PF00234 C2_S12 - (0)- - / - / 2 -
21134_tII_ARATH12 39% 0.730 0.711 PF00234 0 - (0)- - / - / - -
22779_tI_MEDTR9 40% 0.726 0.763 PF00234 C1_S11 - (0)- - / - / 1 -
23537_tII_MEDTR12 40% 0.724 0.724 PF00234 0 - (0)- - / - / - -
24445_tII_SESIN12 49% 0.722 0.735 PF00234 0 - (0)- - / - / - -
25575_tIII_RICCO19 41% 0.718 0.622 PF00234 0 - (0)- - / - / - -
26435_tI_ZEAMP8 99% 0.716 0.716 PF00234 C3_S14 - (0)- - / 1 / 3 -
27456_tII_MAIZE12 53% 0.714 0.714 PF00234 0 - (0)- - / - / - -
28143_tIII_ORYSA16 37% 0.713 0.713 PF00234 0 - (0)- - / - / - -
29636_tII_THECC12 47% 0.712 0.699 PF00234 0 - (0)- - / - / - -
30433_tI_ZEAMP8 86% 0.709 0.709 PF00234 C1_S14 - (0)- - / 2 / 2 -
31130_tII_ARATH12 46% 0.707 0.707 PF00234 0 - (0)- - / - / - -
32540_tII_POPTR12 41% 0.707 0.758 PF00234 0 - (0)- - / - / - -
33154_tIV_ARATH13 36% 0.704 0.703 PF00234 0 - (0)- - / - / - -
34348_tI_RICCO8 47% 0.704 0.704 PF00234 0 - (0)- - / - / - -
35616_tII_THECC12 41% 0.703 0.703 PF00234 0 - (0)- - / - / - -
36543_tII_TAMHI11 43% 0.703 0.703 PF14368 0 - (0)- - / - / - -
37516_tI_POPTR8 47% 0.701 0.746 PF00234 0 - (0)- - / - / - -
38400_tI_VITVI8 61% 0.696 0.657 PF00234 C3_S12 - (0)- - / - / 2 -
39578_t0_PINRA16 36% 0.695 0.754 PF00234 0 - (0)- - / - / - -
40769_tII_VITVI12 39% 0.692 0.708 PF00234 0 - (0)- - / - / - -
41682_tI_BRADI8 73% 0.691 0.673 PF00234 C1_S14 - (0)- - / 2 / 2 -
42142_tIII_WHEAT19 34% 0.691 0.681 PF00234 0 - (0)- - / - / - -
43517_tI_POPTR7 46% 0.689 0.739 PF00234 1 - (0)- - / - / - -
44451_tII_MAIZE12 68% 0.688 0.689 PF00234 C1_S11 - (0)- - / 1 / - -
45437_tI_ZEAMP8 99% 0.687 0.687 PF00234 C2_S14 - (0)- - / 2 / 2 -
46572_tIII_POPTR19 42% 0.686 0.686 PF00234 0 - (0)- - / - / - -
47556_tIII_LILHE19 37% 0.685 0.642 PF00234 0 - (0)- - / - / - -
48360_tI_RICCO8 49% 0.684 0.684 PF00234 C4_S12 - (0)- - / - / 1 -
49141_tIII_WHEAT18 39% 0.682 0.682 PF00234 0 - (0)- - / - / - -
50262_tI_HORVU10 63% 0.678 0.676 PF00234 C5_S13 - (0)- - / 1 / 1 -

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