Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site (All) Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
100118_tII_ORYSA12 51% 0.647 0.649 PF00234 0 - (0)- - / - / - -
101786_tI_MEDTR8 43% 0.646 0.618 PF00234 1 - (0)- - / - / - -
102429_tI_ZEAMP10 87% 0.646 0.667 PF00234 C1_S14 - (0)- - / 2 / 2 -
103243_tI_FRAAN9 70% 0.646 0.630 PF00234 C4_S12 - (0)- - / - / 2 -
104432_tI_ZEAMP9 88% 0.645 0.657 PF00234 C1_S14 - (0)- - / 2 / 2 -
105256_tI_GOSHI8 63% 0.645 0.647 PF00234 C1_S12 - (0)- - / - / 2 -
106106_tII_WHEAT13 53% 0.645 0.603 PF14368 0 - (0)- - / - / - -
107089_tII_WHEAT11 77% 0.645 0.645 PF00234 C5_S11 - (0)- - / 1 / - -
108449_tII_MAIZE13 53% 0.645 0.603 PF14368 0 - (0)- - / - / - -
109005_tI_WHEAT11 70% 0.644 0.644 PF00234 C5_S13 - (0)- - / 1 / 1 -
110424_tI_MAIZE9 86% 0.643 0.643 PF00234 C3_S14 - (0)- - / 2 / 2 -
111087_tII_WHEAT12 97% 0.643 0.663 PF00234 C2_S11 - (0)- - / 1 / - -
112668_tII_BRADI12 49% 0.643 0.640 PF00234 0 - (0)- - / - / - -
113428_tI_MAIZE8 100% 0.642 0.653 PF00234 C2_S14 - (0)- - / 1 / 3 -
114409_tI_ZEADI8 100% 0.642 0.653 PF00234 C2_S14 - (0)- - / 1 / 3 -
115698_tI_POPTR8 63% 0.642 0.632 PF00234 C3_S12 - (0)- - / - / 2 -
116431_tI_ZEAMP8 100% 0.642 0.653 PF00234 C3_S14 - (0)- - / 1 / 3 -
117538_tII_POPTR12 46% 0.641 0.640 PF00234 0 - (0)- - / - / - -
118323_tI_PLAAC10 63% 0.638 0.615 PF00234 C2_S14 - (0)- - / 1 / 3 -
119702_tXI_SELMO11 36% 0.636 0.601 PF00234 0 - (0)- - / - / - -
120619_tI_THECC8 55% 0.636 0.635 PF00234 C2_S13 - (0)- - / 1 / 2 -
121557_tIII_LILLO20 35% 0.635 0.615 PF00234 0 - (0)- - / - / - -
122196_tI_AMAHP9 47% 0.635 0.628 PF00234 C2_S12 - (0)- - / - / 1 -
123410_tI_ZEADI8 88% 0.635 0.655 PF00234 C2_S14 - (0)- - / 2 / 2 -
124195_tI_AMACA9 47% 0.635 0.628 PF00234 C2_S12 - (0)- - / - / 1 -
125311_tI_PICSI8 48% 0.635 0.674 PF00234 C3_S11 - (0)- - / - / 1 -
126091_tII_WHEAT12 99% 0.634 0.644 PF00234 C4_S11 - (0)- - / 1 / - -
127324_tI_PLAOI8 64% 0.634 0.610 PF00234 C3_S14 - (0)- - / 1 / 3 -
128251_tI_GOSHI8 62% 0.633 0.669 PF00234 C2_S12 - (0)- - / - / 2 -
129015_tI_WHEAT11 70% 0.633 0.631 PF00234 C5_S13 - (0)- - / 1 / 1 -
130439_tII_HORVU12 78% 0.633 0.633 PF00234 C4_S11 - (0)- - / - / 1 -
131112_tII_WHEAT12 51% 0.632 0.655 PF00234 C1_S11 - (0)- - / - / 1 -
132008_tI_WHEAT10 73% 0.632 0.633 PF00234 C4_S13 - (0)- - / 1 / 2 -
133438_tI_ZEAMP8 99% 0.632 0.656 PF00234 C2_S14 - (0)- - / 1 / 3 -
134416_tI_MAIZE8 99% 0.632 0.656 PF00234 C2_S14 - (0)- - / 1 / 3 -
135771_tI_MEDTR8 54% 0.632 0.632 PF00234 C2_S13 - (0)- - / - / 3 -
136012_tI_WHEAT10 70% 0.631 0.632 PF00234 C7_S13 - (0)- - / 1 / 1 -
137395_tI_VIGRA9 66% 0.631 0.635 PF00234 C3_S12 - (0)- - / - / 2 -
138068_tI_ORYSA10 80% 0.631 0.577 PF00234 C2_S14 - (0)- - / 1 / 3 -
139053_tI_WHEAT10 80% 0.631 0.577 PF00234 C2_S14 - (0)- - / 1 / 3 -
140007_tI_WHEAT11 71% 0.630 0.612 PF00234 C4_S13 - (0)- - / 1 / 2 -
141019_tI_WHEAT10 69% 0.630 0.635 PF00234 C6_S13 - (0)- - / 1 / 2 -
142524_tI_ORYSJ9 59% 0.630 0.687 PF00234 C3_S12 - (0)- - / - / 2 -
143022_tI_WHEAT11 70% 0.629 0.646 PF00234 C4_S13 - (0)- - / 1 / 1 -
144328_tI_POPTR9 63% 0.629 0.629 PF00234 C3_S12 - (0)- - / - / 2 -
145407_tI_VITVI8 61% 0.629 0.669 PF00234 C3_S13 - (0)- - / - / 3 -
146364_tI_RUBID9 69% 0.628 0.628 PF00234 C4_S14 - (0)- - / 1 / 3 -
147283_tI_LILLO8 57% 0.628 0.628 PF00234 C3_S13 - (0)- - / 1 / 2 -
148316_tI_PICSI8 47% 0.627 0.648 PF00234 0 - (0)- - / - / - -
149010_tI_WHEAT9 70% 0.627 0.611 PF00234 C6_S13 - (0)- - / 1 / 1 -
150570_tIII_LILLO18 36% 0.627 0.535 PF00234 0 - (0)- - / - / - -

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