Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site (All) Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
50287_tI_MALDO7 81% 0.617 0.535 PF00234 C2_S13 - (0)- - / - / 3 -
51053_tI_WHEAT10 80% 0.631 0.577 PF00234 C2_S14 - (0)- - / 1 / 3 -
52152_tIV_ARATH15 80% 0.586 0.588 PF00234 C3_S12 - (0)- - / 2 / - -
53068_tI_ORYSA10 80% 0.631 0.577 PF00234 C2_S14 - (0)- - / 1 / 3 -
54072_tI_ORYSA11 80% 0.593 0.551 PF00234 C2_S14 - (0)- - / 1 / 3 -
55343_tI_PYRCO7 78% 0.588 0.581 PF00234 C2_S13 - (0)- - / - / 3 -
56286_tI_MALDO8 78% 0.550 0.559 PF00234 C3_S13 - (0)- - / - / 3 -
57071_tI_ORYSA10 78% 0.583 0.584 PF00234 C3_S14 - (0)- - / 1 / 3 -
58439_tII_HORVU12 78% 0.633 0.633 PF00234 C4_S11 - (0)- - / - / 1 -
59521_tI_ORYSA9 78% 0.554 0.470 PF00234 C2_S14 - (0)- - / 1 / 3 -
60090_tII_WHEAT12 78% 0.572 0.614 PF00234 C3_S11 - (0)- - / 1 / - -
61285_tI_MALDO8 77% 0.566 0.563 PF00234 C3_S13 - (0)- - / - / 3 -
62380_tI_SOLPN8 77% 0.577 0.587 PF00234 C4_S14 - (0)- - / 2 / 2 -
63089_tII_WHEAT11 77% 0.645 0.645 PF00234 C5_S11 - (0)- - / 1 / - -
64052_tI_WHEAT9 77% 0.529 0.566 PF00234 C2_S14 - (0)- - / 2 / 2 -
65073_tI_ORYSA9 77% 0.529 0.566 PF00234 C2_S14 - (0)- - / 2 / 2 -
66284_tI_MALDO8 77% 0.598 0.599 PF00234 C2_S12 - (0)- - / - / 2 -
67381_tI_SOLSG9 76% 0.594 0.575 PF00234 C3_S13 - (0)- - / 1 / 2 -
68067_tI_ORYSA9 76% 0.558 0.558 PF00234 C2_S14 - (0)- - / 2 / 2 -
69054_tI_WHEAT9 76% 0.558 0.558 PF00234 C2_S14 - (0)- - / 2 / 2 -
70522_tI_ORYSA10 75% 0.533 0.544 PF00234 C2_S14 - (0)- - / 2 / 2 -
71095_tII_WHEAT12 75% 0.585 0.636 PF00234 C2_S11 - (0)- - / 1 / - -
72096_tII_WHEAT12 75% 0.593 0.619 PF00234 C3_S11 - (0)- - / - / 1 -
73374_tI_SOLCH10 75% 0.575 0.575 PF00234 C5_S14 - (0)- - / 1 / 3 -
74093_tII_WHEAT12 75% 0.586 0.610 PF00234 C1_S11 - (0)- - / 1 / - -
75377_tI_SOLLC8 74% 0.519 0.551 PF00234 C2_S14 - (0)- - / 1 / 3 -
76375_tI_SOLCI8 74% 0.625 0.618 PF00234 C3_S14 - (0)- - / 2 / 2 -
77384_tI_SOLTU9 74% 0.544 0.544 PF00234 C2_S13 - (0)- - / - / 2 -
78376_tI_SOLLC9 74% 0.647 0.662 PF00234 C4_S14 - (0)- - / 2 / 2 -
79113_tII_WHEAT12 74% 0.672 0.657 PF00234 C3_S11 - (0)- - / - / 1 -
80379_tI_SOLPN8 74% 0.513 0.522 PF00234 C2_S13 - (0)- - / - / 3 -
81682_tI_BRADI8 73% 0.691 0.673 PF00234 C1_S14 - (0)- - / 2 / 2 -
82008_tI_WHEAT10 73% 0.632 0.633 PF00234 C4_S13 - (0)- - / 1 / 2 -
83546_tII_HORVU12 73% 0.577 0.578 PF00234 C4_S11 - (0)- - / 1 / - -
84094_tII_WHEAT12 73% 0.569 0.567 PF14368 C3_S11 - (0)- - / 1 / - -
85298_tI_TOBAC10 72% 0.525 0.521 PF00234 C3_S13 - (0)- - / - / 2 -
86265_tI_HORVU9 72% 0.468 0.527 PF00234 C2_S14 - (0)- - / 1 / 3 -
87378_tI_SOLLC9 72% 0.559 0.587 PF00234 C3_S13 - (0)- - / - / 3 -
88226_tI_CAPAN10 72% 0.626 0.626 PF00234 C3_S13 - (0)- - / - / 3 -
89385_tI_SOLTU8 72% 0.526 0.511 PF00234 C3_S13 - (0)- - / - / 2 -
90009_tI_WHEAT10 71% 0.622 0.626 PF00234 C5_S13 - (0)- - / 1 / 1 -
91007_tI_WHEAT11 71% 0.630 0.612 PF00234 C4_S13 - (0)- - / 1 / 2 -
92383_tI_SOLTU9 71% 0.548 0.581 PF00234 C2_S13 - (0)- - / - / 3 -
93387_tI_SOLTU9 71% 0.529 0.529 PF00234 C2_S13 - (0)- - / - / 3 -
94386_tI_SOLTU8 71% 0.517 0.514 PF00234 C3_S13 - (0)- - / - / 3 -
95004_tI_WHEAT11 71% 0.596 0.600 PF00234 C4_S13 - (0)- - / 1 / 1 -
96020_tI_WHEAT11 71% 0.623 0.620 PF00234 C4_S13 - (0)- - / 1 / 1 -
97296_tI_TOBAC10 70% 0.594 0.618 PF00234 C3_S13 - (0)- - / - / 3 -
98201_tI_AVIMR8 70% 0.548 0.502 PF00234 C3_S14 - (0)- - / 1 / 3 -
99014_tI_WHEAT11 70% 0.658 0.658 PF00234 C5_S13 - (0)- - / 1 / 1 -
100224_tI_CAPAN10 70% 0.533 0.523 PF00234 C3_S13 - (0)- - / - / 2 -

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