Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site (All) Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1070_tI_ORYSA10 60% 0.473 0.473 PF00234 C1_S15 - (0)- - / - / 5 -
2325_tI_POPCN8 60% 0.523 0.508 PF00234 C1_S15 - (0)- - / - / 5 -
3077_tI_ARATH9 57% 0.530 0.588 PF00234 C2_S14 - (0)- - / 1 / 3 -
4276_tI_LENCU10 59% 0.655 0.619 PF00234 C2_S14 - (0)- - / 1 / 3 -
5682_tI_BRADI8 73% 0.691 0.673 PF00234 C1_S14 - (0)- - / 2 / 2 -
6279_tI_LENCU10 59% 0.533 0.569 PF00234 C2_S14 - (0)- - / 1 / 3 -
7410_tI_ZEADI8 88% 0.635 0.655 PF00234 C2_S14 - (0)- - / 2 / 2 -
8425_tI_MAIZE10 87% 0.652 0.643 PF00234 C3_S14 - (0)- - / 2 / 2 -
9240_tI_FRAAN8 62% 0.574 0.576 PF00234 C2_S14 - (0)- - / 1 / 3 -
10292_tI_NICGL8 61% 0.538 0.527 PF00234 C2_S14 - (0)- - / 1 / 3 -
11437_tI_ZEAMP8 99% 0.687 0.687 PF00234 C2_S14 - (0)- - / 2 / 2 -
12434_tI_ZEAMP8 88% 0.625 0.657 PF00234 C2_S14 - (0)- - / 2 / 2 -
13435_tI_ZEAMP8 99% 0.716 0.716 PF00234 C3_S14 - (0)- - / 1 / 3 -
14215_tI_BRANA8 54% 0.492 0.546 PF00234 C2_S14 - (0)- - / 1 / 3 -
15295_tI_TOBAC8 60% 0.539 0.539 PF00234 C3_S14 - (0)- - / 1 / 3 -
16521_tI_ORYSA9 78% 0.554 0.470 PF00234 C2_S14 - (0)- - / 1 / 3 -
17438_tI_ZEAMP8 99% 0.632 0.656 PF00234 C2_S14 - (0)- - / 1 / 3 -
18245_tI_FRAAN8 69% 0.520 0.519 PF00234 C4_S14 - (0)- - / 1 / 3 -
19324_tI_PLAOI8 64% 0.634 0.610 PF00234 C3_S14 - (0)- - / 1 / 3 -
20428_tI_MAIZE8 100% 0.642 0.653 PF00234 C2_S14 - (0)- - / 1 / 3 -
21069_tI_ORYSA9 64% 0.444 0.464 PF00234 C2_S14 - (0)- - / 2 / 2 -
22068_tI_ORYSA10 80% 0.631 0.577 PF00234 C2_S14 - (0)- - / 1 / 3 -
23436_tI_ZEAMP8 99% 0.661 0.645 PF00234 C2_S14 - (0)- - / 1 / 3 -
24053_tI_WHEAT10 80% 0.631 0.577 PF00234 C2_S14 - (0)- - / 1 / 3 -
25233_tI_CITSI10 67% 0.545 0.546 PF00234 C3_S14 - (0)- - / 1 / 3 -
26281_tI_LEOAR9 65% 0.533 0.505 PF00234 C3_S14 - (0)- - / 1 / 3 -
27259_tI_HELAN8 66% 0.498 0.573 PF00234 C2_S14 - (0)- - / 1 / 3 -
28344_tI_RETRA8 61% 0.543 0.556 PF00234 C4_S14 - (0)- - / 1 / 3 -
29003_tI_WHEAT10 86% 0.608 0.619 PF00234 C2_S14 - (0)- - / 1 / 3 -
30293_tI_NICGL8 60% 0.487 0.461 PF00234 C2_S14 - (0)- - / 1 / 3 -
31054_tI_WHEAT9 76% 0.558 0.558 PF00234 C2_S14 - (0)- - / 2 / 2 -
32290_tI_NICGL9 60% 0.458 0.478 PF00234 C2_S14 - (0)- - / 1 / 3 -
33265_tI_HORVU9 72% 0.468 0.527 PF00234 C2_S14 - (0)- - / 1 / 3 -
34289_tI_NICAT8 59% 0.533 0.544 PF00234 C2_S14 - (0)- - / 1 / 3 -
35364_tI_RUBID9 69% 0.628 0.628 PF00234 C4_S14 - (0)- - / 1 / 3 -
36277_tI_LENCU8 61% 0.559 0.559 PF00234 C3_S14 - (0)- - / 1 / 3 -
37433_tI_ZEAMP8 86% 0.709 0.709 PF00234 C1_S14 - (0)- - / 2 / 2 -
38388_tI_SORBI8 89% 0.673 0.673 PF00234 C2_S14 - (0)- - / 1 / 3 -
39323_tI_PLAAC10 63% 0.638 0.615 PF00234 C2_S14 - (0)- - / 1 / 3 -
40431_tI_ZEAMP8 100% 0.642 0.653 PF00234 C3_S14 - (0)- - / 1 / 3 -
41232_tI_CITJA8 68% 0.507 0.509 PF00234 C2_S14 - (0)- - / 1 / 3 -
42411_tI_ZEADI8 98% 0.657 0.657 PF00234 C3_S14 - (0)- - / 1 / 3 -
43519_tI_TAMHI10 58% 0.397 0.493 PF00234 C4_S14 - (0)- - / 1 / 3 -
44072_tI_ORYSA11 80% 0.593 0.551 PF00234 C2_S14 - (0)- - / 1 / 3 -
45409_tI_ZEADI8 100% 0.642 0.653 PF00234 C2_S14 - (0)- - / 1 / 3 -
46278_tI_LENCU9 60% 0.508 0.528 PF00234 C3_S14 - (0)- - / 1 / 3 -
47280_tI_LENCU9 62% 0.504 0.470 PF00234 C5_S14 - (0)- - / 1 / 3 -
48376_tI_SOLLC9 74% 0.647 0.662 PF00234 C4_S14 - (0)- - / 2 / 2 -
49421_tI_MAIZE8 88% 0.625 0.657 PF00234 C2_S14 - (0)- - / 2 / 2 -
50432_tI_ZEAMP9 88% 0.645 0.657 PF00234 C1_S14 - (0)- - / 2 / 2 -

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