Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site (All) Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1070_tI_ORYSA10 60% 0.473 0.473 PF00234 C1_S15 - (0)- - / - / 5 -
2325_tI_POPCN8 60% 0.523 0.508 PF00234 C1_S15 - (0)- - / - / 5 -
3233_tI_CITSI10 67% 0.545 0.546 PF00234 C3_S14 - (0)- - / 1 / 3 -
4438_tI_ZEAMP8 99% 0.632 0.656 PF00234 C2_S14 - (0)- - / 1 / 3 -
5289_tI_NICAT8 59% 0.533 0.544 PF00234 C2_S14 - (0)- - / 1 / 3 -
6409_tI_ZEADI8 100% 0.642 0.653 PF00234 C2_S14 - (0)- - / 1 / 3 -
7275_tI_LENCU8 60% 0.518 0.521 PF00234 C3_S14 - (0)- - / 1 / 3 -
8073_tI_ORYSA9 77% 0.529 0.566 PF00234 C2_S14 - (0)- - / 2 / 2 -
9773_tI_MEDTR9 61% 0.653 0.622 PF00234 C2_S14 - (0)- - / 1 / 3 -
10413_tI_ZEADI8 99% 0.614 0.603 PF00234 C2_S14 - (0)- - / 1 / 3 -
11259_tI_HELAN8 66% 0.498 0.573 PF00234 C2_S14 - (0)- - / 1 / 3 -
12280_tI_LENCU9 62% 0.504 0.470 PF00234 C5_S14 - (0)- - / 1 / 3 -
13003_tI_WHEAT10 86% 0.608 0.619 PF00234 C2_S14 - (0)- - / 1 / 3 -
14071_tI_ORYSA10 78% 0.583 0.584 PF00234 C3_S14 - (0)- - / 1 / 3 -
15279_tI_LENCU10 59% 0.533 0.569 PF00234 C2_S14 - (0)- - / 1 / 3 -
16215_tI_BRANA8 54% 0.492 0.546 PF00234 C2_S14 - (0)- - / 1 / 3 -
17431_tI_ZEAMP8 100% 0.642 0.653 PF00234 C3_S14 - (0)- - / 1 / 3 -
18374_tI_SOLCH10 75% 0.575 0.575 PF00234 C5_S14 - (0)- - / 1 / 3 -
19380_tI_SOLPN8 77% 0.577 0.587 PF00234 C4_S14 - (0)- - / 2 / 2 -
20278_tI_LENCU9 60% 0.508 0.528 PF00234 C3_S14 - (0)- - / 1 / 3 -
21394_tI_VIGRA8 64% 0.542 0.588 PF00234 C2_S14 - (0)- - / 1 / 3 -
22201_tI_AVIMR8 70% 0.548 0.502 PF00234 C3_S14 - (0)- - / 1 / 3 -
23290_tI_NICGL9 60% 0.458 0.478 PF00234 C2_S14 - (0)- - / 1 / 3 -
24281_tI_LEOAR9 65% 0.533 0.505 PF00234 C3_S14 - (0)- - / 1 / 3 -
25430_tI_ZEAMP8 86% 0.591 0.612 PF00234 C2_S14 - (0)- - / 2 / 2 -
26375_tI_SOLCI8 74% 0.625 0.618 PF00234 C3_S14 - (0)- - / 2 / 2 -
27437_tI_ZEAMP8 99% 0.687 0.687 PF00234 C2_S14 - (0)- - / 2 / 2 -
28068_tI_ORYSA10 80% 0.631 0.577 PF00234 C2_S14 - (0)- - / 1 / 3 -
29519_tI_TAMHI10 58% 0.397 0.493 PF00234 C4_S14 - (0)- - / 1 / 3 -
30001_tI_WHEAT10 100% 0.571 0.623 PF00234 C3_S14 - (0)- - / 1 / 3 -
31240_tI_FRAAN8 62% 0.574 0.576 PF00234 C2_S14 - (0)- - / 1 / 3 -
32421_tI_MAIZE8 88% 0.625 0.657 PF00234 C2_S14 - (0)- - / 2 / 2 -
33410_tI_ZEADI8 88% 0.635 0.655 PF00234 C2_S14 - (0)- - / 2 / 2 -
34323_tI_PLAAC10 63% 0.638 0.615 PF00234 C2_S14 - (0)- - / 1 / 3 -
35424_tI_MAIZE9 86% 0.643 0.643 PF00234 C3_S14 - (0)- - / 2 / 2 -
36245_tI_FRAAN8 69% 0.520 0.519 PF00234 C4_S14 - (0)- - / 1 / 3 -
37365_tI_SALMI8 64% 0.521 0.505 PF00234 C3_S14 - (0)- - / 1 / 3 -
38265_tI_HORVU9 72% 0.468 0.527 PF00234 C2_S14 - (0)- - / 1 / 3 -
39299_tI_TOBAC9 100% 0.548 0.588 PF00234 C4_S14 - (0)- - / 1 / 3 -
40512_tI_CASMO8 64% 0.647 0.652 PF00234 C1_S14 - (0)- - / 1 / 3 -
41292_tI_NICGL8 61% 0.538 0.527 PF00234 C2_S14 - (0)- - / 1 / 3 -
42232_tI_CITJA8 68% 0.507 0.509 PF00234 C2_S14 - (0)- - / 1 / 3 -
43295_tI_TOBAC8 60% 0.539 0.539 PF00234 C3_S14 - (0)- - / 1 / 3 -
44388_tI_SORBI8 89% 0.673 0.673 PF00234 C2_S14 - (0)- - / 1 / 3 -
45069_tI_ORYSA9 64% 0.444 0.464 PF00234 C2_S14 - (0)- - / 2 / 2 -
46522_tI_ORYSA10 75% 0.533 0.544 PF00234 C2_S14 - (0)- - / 2 / 2 -
47376_tI_SOLLC9 74% 0.647 0.662 PF00234 C4_S14 - (0)- - / 2 / 2 -
48053_tI_WHEAT10 80% 0.631 0.577 PF00234 C2_S14 - (0)- - / 1 / 3 -
49389_tI_SORBI9 87% 0.569 0.633 PF00234 C2_S14 - (0)- - / 1 / 3 -
50377_tI_SOLLC8 74% 0.519 0.551 PF00234 C2_S14 - (0)- - / 1 / 3 -

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