Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site (All) Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1070_tI_ORYSA10 60% 0.473 0.473 PF00234 C1_S15 - (0)- - / - / 5 -
2325_tI_POPCN8 60% 0.523 0.508 PF00234 C1_S15 - (0)- - / - / 5 -
3389_tI_SORBI9 87% 0.569 0.633 PF00234 C2_S14 - (0)- - / 1 / 3 -
4519_tI_TAMHI10 58% 0.397 0.493 PF00234 C4_S14 - (0)- - / 1 / 3 -
5069_tI_ORYSA9 64% 0.444 0.464 PF00234 C2_S14 - (0)- - / 2 / 2 -
6293_tI_NICGL8 60% 0.487 0.461 PF00234 C2_S14 - (0)- - / 1 / 3 -
7429_tI_ZEAMP10 87% 0.646 0.667 PF00234 C1_S14 - (0)- - / 2 / 2 -
8428_tI_MAIZE8 100% 0.642 0.653 PF00234 C2_S14 - (0)- - / 1 / 3 -
9323_tI_PLAAC10 63% 0.638 0.615 PF00234 C2_S14 - (0)- - / 1 / 3 -
10411_tI_ZEADI8 98% 0.657 0.657 PF00234 C3_S14 - (0)- - / 1 / 3 -
11265_tI_HORVU9 72% 0.468 0.527 PF00234 C2_S14 - (0)- - / 1 / 3 -
12002_tI_WHEAT11 96% 0.547 0.548 PF00234 C2_S14 - (0)- - / 1 / 2 -
13433_tI_ZEAMP8 86% 0.709 0.709 PF00234 C1_S14 - (0)- - / 2 / 2 -
14276_tI_LENCU10 59% 0.655 0.619 PF00234 C2_S14 - (0)- - / 1 / 3 -
15280_tI_LENCU9 62% 0.504 0.470 PF00234 C5_S14 - (0)- - / 1 / 3 -
16774_tI_MEDTR9 65% 0.548 0.532 PF00234 C2_S14 - (0)- - / 1 / 3 -
17416_tI_MAIZE8 99% 0.632 0.656 PF00234 C2_S14 - (0)- - / 1 / 3 -
18421_tI_MAIZE8 88% 0.625 0.657 PF00234 C2_S14 - (0)- - / 2 / 2 -
19435_tI_ZEAMP8 99% 0.716 0.716 PF00234 C3_S14 - (0)- - / 1 / 3 -
20215_tI_BRANA8 54% 0.492 0.546 PF00234 C2_S14 - (0)- - / 1 / 3 -
21324_tI_PLAOI8 64% 0.634 0.610 PF00234 C3_S14 - (0)- - / 1 / 3 -
22374_tI_SOLCH10 75% 0.575 0.575 PF00234 C5_S14 - (0)- - / 1 / 3 -
23191_tI_AERJP7 57% 0.608 0.625 PF00234 C2_S14 - (0)- - / 1 / 3 -
24388_tI_SORBI8 89% 0.673 0.673 PF00234 C2_S14 - (0)- - / 1 / 3 -
25434_tI_ZEAMP8 88% 0.625 0.657 PF00234 C2_S14 - (0)- - / 2 / 2 -
26277_tI_LENCU8 61% 0.559 0.559 PF00234 C3_S14 - (0)- - / 1 / 3 -
27375_tI_SOLCI8 74% 0.625 0.618 PF00234 C3_S14 - (0)- - / 2 / 2 -
28234_tI_CITSI8 68% 0.477 0.527 PF00234 C3_S14 - (0)- - / 1 / 3 -
29773_tI_MEDTR9 61% 0.653 0.622 PF00234 C2_S14 - (0)- - / 1 / 3 -
30291_tI_NICGL8 59% 0.589 0.591 PF00234 C2_S14 - (0)- - / 1 / 3 -
31067_tI_ORYSA9 76% 0.558 0.558 PF00234 C2_S14 - (0)- - / 2 / 2 -
32232_tI_CITJA8 68% 0.507 0.509 PF00234 C2_S14 - (0)- - / 1 / 3 -
33279_tI_LENCU10 59% 0.533 0.569 PF00234 C2_S14 - (0)- - / 1 / 3 -
34431_tI_ZEAMP8 100% 0.642 0.653 PF00234 C3_S14 - (0)- - / 1 / 3 -
35437_tI_ZEAMP8 99% 0.687 0.687 PF00234 C2_S14 - (0)- - / 2 / 2 -
36240_tI_FRAAN8 62% 0.574 0.576 PF00234 C2_S14 - (0)- - / 1 / 3 -
37054_tI_WHEAT9 76% 0.558 0.558 PF00234 C2_S14 - (0)- - / 2 / 2 -
38521_tI_ORYSA9 78% 0.554 0.470 PF00234 C2_S14 - (0)- - / 1 / 3 -
39376_tI_SOLLC9 74% 0.647 0.662 PF00234 C4_S14 - (0)- - / 2 / 2 -
40412_tI_ZEADI8 98% 0.661 0.649 PF00234 C3_S14 - (0)- - / 1 / 3 -
41364_tI_RUBID9 69% 0.628 0.628 PF00234 C4_S14 - (0)- - / 1 / 3 -
42077_tI_ARATH9 57% 0.530 0.588 PF00234 C2_S14 - (0)- - / 1 / 3 -
43682_tI_BRADI8 73% 0.691 0.673 PF00234 C1_S14 - (0)- - / 2 / 2 -
44413_tI_ZEADI8 99% 0.614 0.603 PF00234 C2_S14 - (0)- - / 1 / 3 -
45281_tI_LEOAR9 65% 0.533 0.505 PF00234 C3_S14 - (0)- - / 1 / 3 -
46073_tI_ORYSA9 77% 0.529 0.566 PF00234 C2_S14 - (0)- - / 2 / 2 -
47684_tI_BRADI8 70% 0.542 0.563 PF00234 C2_S14 - (0)- - / 2 / 2 -
48430_tI_ZEAMP8 86% 0.591 0.612 PF00234 C2_S14 - (0)- - / 2 / 2 -
49425_tI_MAIZE10 87% 0.652 0.643 PF00234 C3_S14 - (0)- - / 2 / 2 -
50231_tI_CICAR8 62% 0.496 0.496 PF00234 C2_S14 - (0)- - / 1 / 3 -

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