Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Modeller
(QMean Score)
Classification code

Binding Site (All) Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
1761_tII_VITVI12 43% 0.852 0.853 PF00234 0 - (0)- - / - / - -
2770_tII_VITVI12 43% 0.857 0.837 PF00234 0 - (0)- - / - / - -
3607_tII_THECC12 40% 0.809 0.809 PF00234 0 - (0)- - / - / - -
4145_tIII_ARATH18 33% 0.764 0.792 PF00234 0 - (0)- - / - / - -
5767_tII_VITVI12 44% 0.753 0.790 PF00234 0 - (0)- - / - / - -
6144_tIII_ORYSA20 37% 0.758 0.784 PF00234 0 - (0)- - / - / - -
7541_tII_POPTR12 40% 0.771 0.772 PF00234 0 - (0)- - / - / - -
8513_tI_POPTR7 48% 0.771 0.769 PF00234 1 - (0)- - / - / - -
9140_tIII_WHEAT20 36% 0.771 0.768 PF00234 0 - (0)- - / - / - -
10147_tIII_ARATH19 41% 0.666 0.767 PF00234 0 - (0)- - / - / - -
11779_tI_MEDTR9 40% 0.726 0.763 PF00234 C1_S11 - (0)- - / - / 1 -
12454_tII_MAIZE13 42% 0.784 0.762 PF14368 0 - (0)- - / - / - -
13146_tIII_ARATH19 43% 0.757 0.759 PF00234 0 - (0)- - / - / - -
14611_tI_THECC8 46% 0.758 0.759 PF00234 0 - (0)- - / - / - -
15540_tII_POPTR12 41% 0.707 0.758 PF00234 0 - (0)- - / - / - -
16578_t0_PINRA16 36% 0.695 0.754 PF00234 0 - (0)- - / - / - -
17516_tI_POPTR8 47% 0.701 0.746 PF00234 0 - (0)- - / - / - -
18740_tII_VITVI12 39% 0.743 0.744 PF00234 0 - (0)- - / - / - -
19517_tI_POPTR7 46% 0.689 0.739 PF00234 1 - (0)- - / - / - -
20445_tII_SESIN12 49% 0.722 0.735 PF00234 0 - (0)- - / - / - -
21577_tIII_ARATH20 41% 0.740 0.732 PF00234 0 - (0)- - / - / - -
22697_tI_POPTR7 46% 0.736 0.731 PF00234 1 - (0)- - / - / - -
23121_tII_ORYSA12 57% 0.457 0.730 PF00234 C4_S11 - (0)- - / - / 1 -
24576_t0_PINRA16 35% 0.752 0.729 PF00234 0 - (0)- - / - / - -
25442_tII_RICCO12 41% 0.751 0.728 PF00234 0 - (0)- - / - / - -
26537_tII_MEDTR12 40% 0.724 0.724 PF00234 0 - (0)- - / - / - -
27620_tI_THECC8 48% 0.736 0.722 PF00234 C2_S12 - (0)- - / - / 2 -
28573_tIII_POPTR20 42% 0.654 0.720 PF00234 0 - (0)- - / - / - -
29458_tII_ZINEL12 45% 0.623 0.718 PF00234 0 - (0)- - / - / - -
30663_tIII_BRADI18 35% 0.665 0.716 PF00234 0 - (0)- - / - / - -
31435_tI_ZEAMP8 99% 0.716 0.716 PF00234 C3_S14 - (0)- - / 1 / 3 -
32081_tI_ARATH8 47% 0.775 0.715 PF00234 1 - (0)- - / - / - -
33456_tII_MAIZE12 53% 0.714 0.714 PF00234 0 - (0)- - / - / - -
34143_tIII_ORYSA16 37% 0.713 0.713 PF00234 0 - (0)- - / - / - -
35099_tII_WHEAT12 51% 0.667 0.711 PF00234 0 - (0)- - / - / - -
36531_tII_PICSI12 42% 0.753 0.711 PF14368 0 - (0)- - / - / - -
37134_tII_ARATH12 39% 0.730 0.711 PF00234 0 - (0)- - / - / - -
38433_tI_ZEAMP8 86% 0.709 0.709 PF00234 C1_S14 - (0)- - / 2 / 2 -
39769_tII_VITVI12 39% 0.692 0.708 PF00234 0 - (0)- - / - / - -
40264_tI_HORVU8 47% 0.668 0.708 PF00234 C2_S12 - (0)- - / - / 1 -
41130_tII_ARATH12 46% 0.707 0.707 PF00234 0 - (0)- - / - / - -
42348_tI_RICCO8 47% 0.704 0.704 PF00234 0 - (0)- - / - / - -
43535_tII_MAIZE12 63% 0.659 0.704 PF00234 C2_S11 - (0)- - / 1 / - -
44616_tII_THECC12 41% 0.703 0.703 PF00234 0 - (0)- - / - / - -
45154_tIV_ARATH13 36% 0.704 0.703 PF00234 0 - (0)- - / - / - -
46543_tII_TAMHI11 43% 0.703 0.703 PF14368 0 - (0)- - / - / - -
47636_tII_THECC12 47% 0.712 0.699 PF00234 0 - (0)- - / - / - -
48658_tIX_PHYPA15 34% 0.578 0.693 PF00234 0 - (0)- - / - / - -
49539_tII_POPTR12 43% 0.671 0.692 PF00234 0 - (0)- - / - / - -
50086_tII_WHEAT12 97% 0.625 0.691 PF00234 C5_S11 - (0)- - / 1 / - -

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